Protein–RNA interactions for Protein: Q9QZ88

Vps29, Vacuolar protein sorting-associated protein 29, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps29Q9QZ88 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vps29Q9QZ88 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
Vps29Q9QZ88 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vps29Q9QZ88 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Vps29Q9QZ88 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vps29Q9QZ88 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Vps29Q9QZ88 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Vps29Q9QZ88 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Vps29Q9QZ88 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vps29Q9QZ88 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vps29Q9QZ88 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vps29Q9QZ88 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Vps29Q9QZ88 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.14■□□□□ 0.81
Vps29Q9QZ88 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vps29Q9QZ88 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Vps29Q9QZ88 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Vps29Q9QZ88 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vps29Q9QZ88 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vps29Q9QZ88 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.13■□□□□ 0.81
Vps29Q9QZ88 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vps29Q9QZ88 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vps29Q9QZ88 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vps29Q9QZ88 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vps29Q9QZ88 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vps29Q9QZ88 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Vps29Q9QZ88 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vps29Q9QZ88 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Vps29Q9QZ88 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Vps29Q9QZ88 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.12■□□□□ 0.81
Vps29Q9QZ88 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vps29Q9QZ88 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vps29Q9QZ88 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vps29Q9QZ88 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Vps29Q9QZ88 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.11■□□□□ 0.81
Vps29Q9QZ88 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.11■□□□□ 0.81
Vps29Q9QZ88 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vps29Q9QZ88 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vps29Q9QZ88 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vps29Q9QZ88 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Vps29Q9QZ88 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vps29Q9QZ88 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vps29Q9QZ88 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Vps29Q9QZ88 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Vps29Q9QZ88 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vps29Q9QZ88 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Vps29Q9QZ88 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.09■□□□□ 0.81
Vps29Q9QZ88 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Vps29Q9QZ88 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vps29Q9QZ88 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.09■□□□□ 0.81
Vps29Q9QZ88 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vps29Q9QZ88 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Vps29Q9QZ88 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Vps29Q9QZ88 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Vps29Q9QZ88 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Vps29Q9QZ88 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Vps29Q9QZ88 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Vps29Q9QZ88 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.08■□□□□ 0.81
Vps29Q9QZ88 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Vps29Q9QZ88 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Vps29Q9QZ88 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Vps29Q9QZ88 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Vps29Q9QZ88 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Vps29Q9QZ88 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vps29Q9QZ88 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.07■□□□□ 0.8
Vps29Q9QZ88 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vps29Q9QZ88 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vps29Q9QZ88 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vps29Q9QZ88 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vps29Q9QZ88 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Vps29Q9QZ88 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Vps29Q9QZ88 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.06■□□□□ 0.8
Vps29Q9QZ88 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vps29Q9QZ88 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.06■□□□□ 0.8
Vps29Q9QZ88 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vps29Q9QZ88 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.06■□□□□ 0.8
Vps29Q9QZ88 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Vps29Q9QZ88 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
Vps29Q9QZ88 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vps29Q9QZ88 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.05■□□□□ 0.8
Vps29Q9QZ88 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.05■□□□□ 0.8
Vps29Q9QZ88 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.05■□□□□ 0.8
Vps29Q9QZ88 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vps29Q9QZ88 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
Vps29Q9QZ88 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Vps29Q9QZ88 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Vps29Q9QZ88 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Vps29Q9QZ88 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.04■□□□□ 0.8
Vps29Q9QZ88 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vps29Q9QZ88 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vps29Q9QZ88 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Vps29Q9QZ88 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vps29Q9QZ88 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.04■□□□□ 0.8
Vps29Q9QZ88 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vps29Q9QZ88 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Vps29Q9QZ88 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vps29Q9QZ88 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vps29Q9QZ88 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
Vps29Q9QZ88 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.03■□□□□ 0.8
Vps29Q9QZ88 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vps29Q9QZ88 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms