Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.85■□□□□ 0.61
Sec61a2Q9JLR1 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.85■□□□□ 0.61
Sec61a2Q9JLR1 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sec61a2Q9JLR1 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sec61a2Q9JLR1 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sec61a2Q9JLR1 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sec61a2Q9JLR1 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sec61a2Q9JLR1 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sec61a2Q9JLR1 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.84■□□□□ 0.61
Sec61a2Q9JLR1 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.84■□□□□ 0.61
Sec61a2Q9JLR1 Gm5921-201ENSMUST00000075898 882 ntBASIC18.84■□□□□ 0.61
Sec61a2Q9JLR1 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Sec61a2Q9JLR1 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sec61a2Q9JLR1 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
Sec61a2Q9JLR1 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sec61a2Q9JLR1 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sec61a2Q9JLR1 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.83■□□□□ 0.6
Sec61a2Q9JLR1 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Sec61a2Q9JLR1 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.83■□□□□ 0.6
Sec61a2Q9JLR1 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.83■□□□□ 0.6
Sec61a2Q9JLR1 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
Sec61a2Q9JLR1 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sec61a2Q9JLR1 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sec61a2Q9JLR1 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Sec61a2Q9JLR1 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sec61a2Q9JLR1 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.83■□□□□ 0.6
Sec61a2Q9JLR1 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sec61a2Q9JLR1 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Sec61a2Q9JLR1 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sec61a2Q9JLR1 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.82■□□□□ 0.6
Sec61a2Q9JLR1 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sec61a2Q9JLR1 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sec61a2Q9JLR1 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sec61a2Q9JLR1 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sec61a2Q9JLR1 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sec61a2Q9JLR1 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sec61a2Q9JLR1 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sec61a2Q9JLR1 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Sec61a2Q9JLR1 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sec61a2Q9JLR1 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sec61a2Q9JLR1 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sec61a2Q9JLR1 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.81■□□□□ 0.6
Sec61a2Q9JLR1 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sec61a2Q9JLR1 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sec61a2Q9JLR1 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.81■□□□□ 0.6
Sec61a2Q9JLR1 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sec61a2Q9JLR1 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sec61a2Q9JLR1 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sec61a2Q9JLR1 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sec61a2Q9JLR1 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Sec61a2Q9JLR1 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sec61a2Q9JLR1 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.8■□□□□ 0.6
Sec61a2Q9JLR1 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sec61a2Q9JLR1 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sec61a2Q9JLR1 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sec61a2Q9JLR1 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Sec61a2Q9JLR1 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Sec61a2Q9JLR1 Gm13238-201ENSMUST00000117655 780 ntBASIC18.79■□□□□ 0.6
Sec61a2Q9JLR1 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.79■□□□□ 0.6
Sec61a2Q9JLR1 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sec61a2Q9JLR1 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sec61a2Q9JLR1 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sec61a2Q9JLR1 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sec61a2Q9JLR1 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Sec61a2Q9JLR1 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Sec61a2Q9JLR1 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Sec61a2Q9JLR1 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Sec61a2Q9JLR1 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sec61a2Q9JLR1 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Sec61a2Q9JLR1 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sec61a2Q9JLR1 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Sec61a2Q9JLR1 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sec61a2Q9JLR1 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sec61a2Q9JLR1 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sec61a2Q9JLR1 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.77■□□□□ 0.6
Sec61a2Q9JLR1 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.77■□□□□ 0.59
Sec61a2Q9JLR1 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.77■□□□□ 0.59
Sec61a2Q9JLR1 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Sec61a2Q9JLR1 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.77■□□□□ 0.59
Sec61a2Q9JLR1 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sec61a2Q9JLR1 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sec61a2Q9JLR1 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Sec61a2Q9JLR1 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sec61a2Q9JLR1 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sec61a2Q9JLR1 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Sec61a2Q9JLR1 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sec61a2Q9JLR1 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sec61a2Q9JLR1 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sec61a2Q9JLR1 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sec61a2Q9JLR1 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sec61a2Q9JLR1 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Sec61a2Q9JLR1 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sec61a2Q9JLR1 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sec61a2Q9JLR1 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sec61a2Q9JLR1 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sec61a2Q9JLR1 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sec61a2Q9JLR1 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sec61a2Q9JLR1 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sec61a2Q9JLR1 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sec61a2Q9JLR1 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms