Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Gm42418-201ENSMUST00000182010 1831 ntBASIC16.91■□□□□ 0.3
Smco4Q9JIS3 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.91■□□□□ 0.3
Smco4Q9JIS3 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Smco4Q9JIS3 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smco4Q9JIS3 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smco4Q9JIS3 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC16.9■□□□□ 0.3
Smco4Q9JIS3 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smco4Q9JIS3 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smco4Q9JIS3 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Smco4Q9JIS3 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Smco4Q9JIS3 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smco4Q9JIS3 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
Smco4Q9JIS3 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smco4Q9JIS3 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smco4Q9JIS3 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC16.89■□□□□ 0.29
Smco4Q9JIS3 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smco4Q9JIS3 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smco4Q9JIS3 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Smco4Q9JIS3 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Smco4Q9JIS3 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Smco4Q9JIS3 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.88■□□□□ 0.29
Smco4Q9JIS3 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Smco4Q9JIS3 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Smco4Q9JIS3 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Smco4Q9JIS3 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smco4Q9JIS3 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smco4Q9JIS3 Gm28731-201ENSMUST00000185564 1569 ntBASIC16.87■□□□□ 0.29
Smco4Q9JIS3 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smco4Q9JIS3 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Smco4Q9JIS3 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Smco4Q9JIS3 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smco4Q9JIS3 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smco4Q9JIS3 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
Smco4Q9JIS3 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smco4Q9JIS3 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smco4Q9JIS3 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smco4Q9JIS3 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Smco4Q9JIS3 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Smco4Q9JIS3 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smco4Q9JIS3 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Smco4Q9JIS3 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smco4Q9JIS3 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Smco4Q9JIS3 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smco4Q9JIS3 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smco4Q9JIS3 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Smco4Q9JIS3 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smco4Q9JIS3 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smco4Q9JIS3 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smco4Q9JIS3 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smco4Q9JIS3 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC16.85■□□□□ 0.29
Smco4Q9JIS3 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.85■□□□□ 0.29
Smco4Q9JIS3 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.85■□□□□ 0.29
Smco4Q9JIS3 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smco4Q9JIS3 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smco4Q9JIS3 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smco4Q9JIS3 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
Smco4Q9JIS3 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smco4Q9JIS3 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.84■□□□□ 0.29
Smco4Q9JIS3 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC16.84■□□□□ 0.29
Smco4Q9JIS3 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Smco4Q9JIS3 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smco4Q9JIS3 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smco4Q9JIS3 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smco4Q9JIS3 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Smco4Q9JIS3 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smco4Q9JIS3 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smco4Q9JIS3 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smco4Q9JIS3 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smco4Q9JIS3 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Smco4Q9JIS3 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smco4Q9JIS3 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Smco4Q9JIS3 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smco4Q9JIS3 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smco4Q9JIS3 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Smco4Q9JIS3 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Smco4Q9JIS3 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smco4Q9JIS3 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smco4Q9JIS3 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.83■□□□□ 0.28
Smco4Q9JIS3 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
Smco4Q9JIS3 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smco4Q9JIS3 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smco4Q9JIS3 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smco4Q9JIS3 Kdm3b-204ENSMUST00000224715 2032 ntBASIC16.82■□□□□ 0.28
Smco4Q9JIS3 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Smco4Q9JIS3 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smco4Q9JIS3 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smco4Q9JIS3 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smco4Q9JIS3 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smco4Q9JIS3 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC16.82■□□□□ 0.28
Smco4Q9JIS3 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smco4Q9JIS3 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smco4Q9JIS3 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Smco4Q9JIS3 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smco4Q9JIS3 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Smco4Q9JIS3 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smco4Q9JIS3 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.81■□□□□ 0.28
Smco4Q9JIS3 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.81■□□□□ 0.28
Smco4Q9JIS3 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smco4Q9JIS3 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smco4Q9JIS3 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms