Protein–RNA interactions for Protein: Q9JI43

Rhox4b, Homeobox protein EHOX, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4bQ9JI43 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rhox4bQ9JI43 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rhox4bQ9JI43 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rhox4bQ9JI43 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rhox4bQ9JI43 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Rhox4bQ9JI43 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rhox4bQ9JI43 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rhox4bQ9JI43 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rhox4bQ9JI43 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rhox4bQ9JI43 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC16.83■□□□□ 0.28
Rhox4bQ9JI43 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC16.83■□□□□ 0.28
Rhox4bQ9JI43 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC16.83■□□□□ 0.28
Rhox4bQ9JI43 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Rhox4bQ9JI43 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rhox4bQ9JI43 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rhox4bQ9JI43 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rhox4bQ9JI43 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rhox4bQ9JI43 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rhox4bQ9JI43 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rhox4bQ9JI43 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rhox4bQ9JI43 Gm7199-201ENSMUST00000118327 1485 ntBASIC16.81■□□□□ 0.28
Rhox4bQ9JI43 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rhox4bQ9JI43 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Rhox4bQ9JI43 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC16.81■□□□□ 0.28
Rhox4bQ9JI43 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC16.81■□□□□ 0.28
Rhox4bQ9JI43 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Rhox4bQ9JI43 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rhox4bQ9JI43 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rhox4bQ9JI43 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC16.81■□□□□ 0.28
Rhox4bQ9JI43 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rhox4bQ9JI43 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rhox4bQ9JI43 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rhox4bQ9JI43 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rhox4bQ9JI43 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rhox4bQ9JI43 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rhox4bQ9JI43 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rhox4bQ9JI43 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.8■□□□□ 0.28
Rhox4bQ9JI43 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Rhox4bQ9JI43 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Rhox4bQ9JI43 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC16.8■□□□□ 0.28
Rhox4bQ9JI43 Gm42809-201ENSMUST00000198429 1138 ntBASIC16.8■□□□□ 0.28
Rhox4bQ9JI43 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rhox4bQ9JI43 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC16.8■□□□□ 0.28
Rhox4bQ9JI43 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rhox4bQ9JI43 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rhox4bQ9JI43 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rhox4bQ9JI43 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rhox4bQ9JI43 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rhox4bQ9JI43 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rhox4bQ9JI43 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rhox4bQ9JI43 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC16.79■□□□□ 0.28
Rhox4bQ9JI43 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rhox4bQ9JI43 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC16.78■□□□□ 0.28
Rhox4bQ9JI43 Golph3-202ENSMUST00000226517 2359 ntBASIC16.78■□□□□ 0.28
Rhox4bQ9JI43 Gm42418-201ENSMUST00000182010 1831 ntBASIC16.78■□□□□ 0.28
Rhox4bQ9JI43 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rhox4bQ9JI43 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Rhox4bQ9JI43 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rhox4bQ9JI43 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rhox4bQ9JI43 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rhox4bQ9JI43 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rhox4bQ9JI43 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rhox4bQ9JI43 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Rhox4bQ9JI43 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Rhox4bQ9JI43 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC16.77■□□□□ 0.28
Rhox4bQ9JI43 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rhox4bQ9JI43 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rhox4bQ9JI43 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rhox4bQ9JI43 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
Rhox4bQ9JI43 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rhox4bQ9JI43 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rhox4bQ9JI43 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Rhox4bQ9JI43 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rhox4bQ9JI43 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rhox4bQ9JI43 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rhox4bQ9JI43 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rhox4bQ9JI43 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rhox4bQ9JI43 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC16.76■□□□□ 0.27
Rhox4bQ9JI43 Gm13889-201ENSMUST00000099689 1386 ntBASIC16.76■□□□□ 0.27
Rhox4bQ9JI43 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rhox4bQ9JI43 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rhox4bQ9JI43 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rhox4bQ9JI43 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rhox4bQ9JI43 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rhox4bQ9JI43 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rhox4bQ9JI43 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rhox4bQ9JI43 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rhox4bQ9JI43 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rhox4bQ9JI43 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rhox4bQ9JI43 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rhox4bQ9JI43 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rhox4bQ9JI43 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rhox4bQ9JI43 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rhox4bQ9JI43 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rhox4bQ9JI43 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Rhox4bQ9JI43 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rhox4bQ9JI43 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rhox4bQ9JI43 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC16.74■□□□□ 0.27
Rhox4bQ9JI43 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rhox4bQ9JI43 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms