Protein–RNA interactions for Protein: Q9ES97

Rtn3, Reticulon-3, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3Q9ES97 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rtn3Q9ES97 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
Rtn3Q9ES97 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Rtn3Q9ES97 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rtn3Q9ES97 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
Rtn3Q9ES97 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Rtn3Q9ES97 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rtn3Q9ES97 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rtn3Q9ES97 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Rtn3Q9ES97 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rtn3Q9ES97 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rtn3Q9ES97 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Rtn3Q9ES97 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rtn3Q9ES97 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rtn3Q9ES97 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rtn3Q9ES97 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rtn3Q9ES97 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rtn3Q9ES97 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC22.3■■□□□ 1.16
Rtn3Q9ES97 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Rtn3Q9ES97 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rtn3Q9ES97 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rtn3Q9ES97 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rtn3Q9ES97 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC22.3■■□□□ 1.16
Rtn3Q9ES97 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rtn3Q9ES97 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Rtn3Q9ES97 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC22.29■■□□□ 1.16
Rtn3Q9ES97 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Rtn3Q9ES97 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Rtn3Q9ES97 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Rtn3Q9ES97 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rtn3Q9ES97 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rtn3Q9ES97 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC22.28■■□□□ 1.16
Rtn3Q9ES97 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Rtn3Q9ES97 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Rtn3Q9ES97 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Rtn3Q9ES97 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC22.28■■□□□ 1.16
Rtn3Q9ES97 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC22.28■■□□□ 1.16
Rtn3Q9ES97 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Rtn3Q9ES97 Gm15820-201ENSMUST00000201566 728 ntBASIC22.27■■□□□ 1.16
Rtn3Q9ES97 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC22.27■■□□□ 1.16
Rtn3Q9ES97 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC22.27■■□□□ 1.16
Rtn3Q9ES97 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Rtn3Q9ES97 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Rtn3Q9ES97 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rtn3Q9ES97 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
Rtn3Q9ES97 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rtn3Q9ES97 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rtn3Q9ES97 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Rtn3Q9ES97 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC22.26■■□□□ 1.15
Rtn3Q9ES97 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rtn3Q9ES97 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rtn3Q9ES97 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Rtn3Q9ES97 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Rtn3Q9ES97 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Rtn3Q9ES97 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rtn3Q9ES97 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rtn3Q9ES97 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
Rtn3Q9ES97 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC22.24■■□□□ 1.15
Rtn3Q9ES97 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Rtn3Q9ES97 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rtn3Q9ES97 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rtn3Q9ES97 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Rtn3Q9ES97 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC22.24■■□□□ 1.15
Rtn3Q9ES97 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Rtn3Q9ES97 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rtn3Q9ES97 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC22.24■■□□□ 1.15
Rtn3Q9ES97 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rtn3Q9ES97 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
Rtn3Q9ES97 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rtn3Q9ES97 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rtn3Q9ES97 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Rtn3Q9ES97 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC22.23■■□□□ 1.15
Rtn3Q9ES97 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rtn3Q9ES97 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rtn3Q9ES97 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rtn3Q9ES97 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC22.23■■□□□ 1.15
Rtn3Q9ES97 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Rtn3Q9ES97 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rtn3Q9ES97 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Rtn3Q9ES97 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
Rtn3Q9ES97 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rtn3Q9ES97 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Rtn3Q9ES97 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rtn3Q9ES97 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rtn3Q9ES97 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rtn3Q9ES97 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Rtn3Q9ES97 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Rtn3Q9ES97 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Rtn3Q9ES97 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.15
Rtn3Q9ES97 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rtn3Q9ES97 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rtn3Q9ES97 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rtn3Q9ES97 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rtn3Q9ES97 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC22.2■■□□□ 1.14
Rtn3Q9ES97 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC22.2■■□□□ 1.14
Rtn3Q9ES97 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Rtn3Q9ES97 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rtn3Q9ES97 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rtn3Q9ES97 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Rtn3Q9ES97 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms