Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.87■□□□□ 0.93
Tubb3Q9ERD7 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tubb3Q9ERD7 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tubb3Q9ERD7 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tubb3Q9ERD7 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tubb3Q9ERD7 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.86■□□□□ 0.93
Tubb3Q9ERD7 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Tubb3Q9ERD7 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tubb3Q9ERD7 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tubb3Q9ERD7 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Tubb3Q9ERD7 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tubb3Q9ERD7 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tubb3Q9ERD7 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tubb3Q9ERD7 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tubb3Q9ERD7 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tubb3Q9ERD7 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tubb3Q9ERD7 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.86■□□□□ 0.93
Tubb3Q9ERD7 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tubb3Q9ERD7 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tubb3Q9ERD7 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tubb3Q9ERD7 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tubb3Q9ERD7 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Tubb3Q9ERD7 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tubb3Q9ERD7 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Tubb3Q9ERD7 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Tubb3Q9ERD7 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tubb3Q9ERD7 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.84■□□□□ 0.93
Tubb3Q9ERD7 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.84■□□□□ 0.93
Tubb3Q9ERD7 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tubb3Q9ERD7 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Tubb3Q9ERD7 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.83■□□□□ 0.93
Tubb3Q9ERD7 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Tubb3Q9ERD7 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Tubb3Q9ERD7 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tubb3Q9ERD7 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.82■□□□□ 0.92
Tubb3Q9ERD7 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Tubb3Q9ERD7 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tubb3Q9ERD7 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tubb3Q9ERD7 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Tubb3Q9ERD7 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tubb3Q9ERD7 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tubb3Q9ERD7 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tubb3Q9ERD7 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.81■□□□□ 0.92
Tubb3Q9ERD7 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.81■□□□□ 0.92
Tubb3Q9ERD7 Gm15820-201ENSMUST00000201566 728 ntBASIC20.81■□□□□ 0.92
Tubb3Q9ERD7 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Tubb3Q9ERD7 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Tubb3Q9ERD7 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tubb3Q9ERD7 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tubb3Q9ERD7 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tubb3Q9ERD7 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tubb3Q9ERD7 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.8■□□□□ 0.92
Tubb3Q9ERD7 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tubb3Q9ERD7 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tubb3Q9ERD7 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.79■□□□□ 0.92
Tubb3Q9ERD7 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tubb3Q9ERD7 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.79■□□□□ 0.92
Tubb3Q9ERD7 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tubb3Q9ERD7 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tubb3Q9ERD7 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tubb3Q9ERD7 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tubb3Q9ERD7 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Tubb3Q9ERD7 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Tubb3Q9ERD7 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tubb3Q9ERD7 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tubb3Q9ERD7 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Tubb3Q9ERD7 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Tubb3Q9ERD7 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tubb3Q9ERD7 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tubb3Q9ERD7 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Tubb3Q9ERD7 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tubb3Q9ERD7 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
Tubb3Q9ERD7 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tubb3Q9ERD7 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.77■□□□□ 0.92
Tubb3Q9ERD7 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tubb3Q9ERD7 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tubb3Q9ERD7 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tubb3Q9ERD7 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Tubb3Q9ERD7 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tubb3Q9ERD7 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tubb3Q9ERD7 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.76■□□□□ 0.91
Tubb3Q9ERD7 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.76■□□□□ 0.91
Tubb3Q9ERD7 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tubb3Q9ERD7 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Tubb3Q9ERD7 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tubb3Q9ERD7 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tubb3Q9ERD7 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Tubb3Q9ERD7 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Tubb3Q9ERD7 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.75■□□□□ 0.91
Tubb3Q9ERD7 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Tubb3Q9ERD7 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Tubb3Q9ERD7 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tubb3Q9ERD7 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tubb3Q9ERD7 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tubb3Q9ERD7 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tubb3Q9ERD7 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tubb3Q9ERD7 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.74■□□□□ 0.91
Tubb3Q9ERD7 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Tubb3Q9ERD7 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Tubb3Q9ERD7 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms