Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Vps35Q9EQH3 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.02■□□□□ 0.96
Vps35Q9EQH3 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Vps35Q9EQH3 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Vps35Q9EQH3 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Vps35Q9EQH3 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Vps35Q9EQH3 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Vps35Q9EQH3 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Vps35Q9EQH3 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Vps35Q9EQH3 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Vps35Q9EQH3 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Vps35Q9EQH3 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Vps35Q9EQH3 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.01■□□□□ 0.95
Vps35Q9EQH3 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.01■□□□□ 0.95
Vps35Q9EQH3 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Vps35Q9EQH3 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.01■□□□□ 0.95
Vps35Q9EQH3 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.01■□□□□ 0.95
Vps35Q9EQH3 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
Vps35Q9EQH3 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.01■□□□□ 0.95
Vps35Q9EQH3 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
Vps35Q9EQH3 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Vps35Q9EQH3 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Vps35Q9EQH3 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21■□□□□ 0.95
Vps35Q9EQH3 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Vps35Q9EQH3 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Vps35Q9EQH3 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Vps35Q9EQH3 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Vps35Q9EQH3 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Vps35Q9EQH3 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Vps35Q9EQH3 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Vps35Q9EQH3 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Vps35Q9EQH3 Gm10232-201ENSMUST00000089221 720 ntBASIC20.98■□□□□ 0.95
Vps35Q9EQH3 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.98■□□□□ 0.95
Vps35Q9EQH3 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
Vps35Q9EQH3 Gm15546-201ENSMUST00000122095 826 ntBASIC20.97■□□□□ 0.95
Vps35Q9EQH3 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Vps35Q9EQH3 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Vps35Q9EQH3 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Vps35Q9EQH3 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Vps35Q9EQH3 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Vps35Q9EQH3 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Vps35Q9EQH3 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Vps35Q9EQH3 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Vps35Q9EQH3 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Vps35Q9EQH3 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Vps35Q9EQH3 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Vps35Q9EQH3 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.95■□□□□ 0.94
Vps35Q9EQH3 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Vps35Q9EQH3 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Vps35Q9EQH3 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.95■□□□□ 0.94
Vps35Q9EQH3 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Vps35Q9EQH3 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Vps35Q9EQH3 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Vps35Q9EQH3 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vps35Q9EQH3 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.94■□□□□ 0.94
Vps35Q9EQH3 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.94■□□□□ 0.94
Vps35Q9EQH3 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vps35Q9EQH3 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vps35Q9EQH3 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vps35Q9EQH3 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vps35Q9EQH3 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vps35Q9EQH3 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vps35Q9EQH3 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Vps35Q9EQH3 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vps35Q9EQH3 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vps35Q9EQH3 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vps35Q9EQH3 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vps35Q9EQH3 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vps35Q9EQH3 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Vps35Q9EQH3 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vps35Q9EQH3 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vps35Q9EQH3 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vps35Q9EQH3 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vps35Q9EQH3 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.92■□□□□ 0.94
Vps35Q9EQH3 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Vps35Q9EQH3 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.91■□□□□ 0.94
Vps35Q9EQH3 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Vps35Q9EQH3 Gm15820-201ENSMUST00000201566 728 ntBASIC20.91■□□□□ 0.94
Vps35Q9EQH3 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Vps35Q9EQH3 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Vps35Q9EQH3 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Vps35Q9EQH3 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Vps35Q9EQH3 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.9■□□□□ 0.94
Vps35Q9EQH3 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.9■□□□□ 0.94
Vps35Q9EQH3 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.9■□□□□ 0.94
Vps35Q9EQH3 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
Vps35Q9EQH3 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Vps35Q9EQH3 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Vps35Q9EQH3 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Vps35Q9EQH3 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Vps35Q9EQH3 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.89■□□□□ 0.93
Vps35Q9EQH3 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.89■□□□□ 0.93
Vps35Q9EQH3 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Vps35Q9EQH3 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vps35Q9EQH3 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vps35Q9EQH3 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vps35Q9EQH3 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.88■□□□□ 0.93
Vps35Q9EQH3 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Vps35Q9EQH3 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vps35Q9EQH3 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms