Protein–RNA interactions for Protein: Q9DC28

Csnk1d, Casein kinase I isoform delta, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csnk1dQ9DC28 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Csnk1dQ9DC28 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Csnk1dQ9DC28 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Csnk1dQ9DC28 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Csnk1dQ9DC28 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Csnk1dQ9DC28 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Csnk1dQ9DC28 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Csnk1dQ9DC28 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Csnk1dQ9DC28 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Csnk1dQ9DC28 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Csnk1dQ9DC28 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Csnk1dQ9DC28 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.01■□□□□ 0.95
Csnk1dQ9DC28 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Csnk1dQ9DC28 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Csnk1dQ9DC28 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Csnk1dQ9DC28 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Csnk1dQ9DC28 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Csnk1dQ9DC28 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Csnk1dQ9DC28 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21■□□□□ 0.95
Csnk1dQ9DC28 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21■□□□□ 0.95
Csnk1dQ9DC28 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Csnk1dQ9DC28 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Csnk1dQ9DC28 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Csnk1dQ9DC28 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Csnk1dQ9DC28 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Csnk1dQ9DC28 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Csnk1dQ9DC28 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Csnk1dQ9DC28 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Csnk1dQ9DC28 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Csnk1dQ9DC28 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.98■□□□□ 0.95
Csnk1dQ9DC28 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Csnk1dQ9DC28 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.98■□□□□ 0.95
Csnk1dQ9DC28 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.98■□□□□ 0.95
Csnk1dQ9DC28 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Csnk1dQ9DC28 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Csnk1dQ9DC28 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Csnk1dQ9DC28 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Csnk1dQ9DC28 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Csnk1dQ9DC28 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Csnk1dQ9DC28 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Csnk1dQ9DC28 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Csnk1dQ9DC28 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.97■□□□□ 0.95
Csnk1dQ9DC28 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Csnk1dQ9DC28 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Csnk1dQ9DC28 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Csnk1dQ9DC28 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Csnk1dQ9DC28 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Csnk1dQ9DC28 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Csnk1dQ9DC28 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Csnk1dQ9DC28 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Csnk1dQ9DC28 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Csnk1dQ9DC28 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Csnk1dQ9DC28 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Csnk1dQ9DC28 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Csnk1dQ9DC28 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Csnk1dQ9DC28 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.95■□□□□ 0.94
Csnk1dQ9DC28 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Csnk1dQ9DC28 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.95■□□□□ 0.94
Csnk1dQ9DC28 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Csnk1dQ9DC28 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Csnk1dQ9DC28 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.94■□□□□ 0.94
Csnk1dQ9DC28 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.94■□□□□ 0.94
Csnk1dQ9DC28 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
Csnk1dQ9DC28 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Csnk1dQ9DC28 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Csnk1dQ9DC28 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Csnk1dQ9DC28 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Csnk1dQ9DC28 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Csnk1dQ9DC28 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Csnk1dQ9DC28 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Csnk1dQ9DC28 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Csnk1dQ9DC28 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Csnk1dQ9DC28 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Csnk1dQ9DC28 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Csnk1dQ9DC28 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
Csnk1dQ9DC28 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Csnk1dQ9DC28 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Csnk1dQ9DC28 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.92■□□□□ 0.94
Csnk1dQ9DC28 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Csnk1dQ9DC28 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Csnk1dQ9DC28 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Csnk1dQ9DC28 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Csnk1dQ9DC28 Gm22238-201ENSMUST00000175222 88 ntBASIC20.91■□□□□ 0.94
Csnk1dQ9DC28 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Csnk1dQ9DC28 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.91■□□□□ 0.94
Csnk1dQ9DC28 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
Csnk1dQ9DC28 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Csnk1dQ9DC28 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Csnk1dQ9DC28 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Csnk1dQ9DC28 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Csnk1dQ9DC28 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Csnk1dQ9DC28 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
Csnk1dQ9DC28 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.9■□□□□ 0.94
Csnk1dQ9DC28 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Csnk1dQ9DC28 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Csnk1dQ9DC28 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Csnk1dQ9DC28 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.89■□□□□ 0.94
Csnk1dQ9DC28 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Csnk1dQ9DC28 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Csnk1dQ9DC28 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms