Protein–RNA interactions for Protein: Q9D9V4

Rsph9, Radial spoke head protein 9 homolog, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph9Q9D9V4 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.59■□□□□ 0.89
Rsph9Q9D9V4 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.59■□□□□ 0.89
Rsph9Q9D9V4 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rsph9Q9D9V4 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rsph9Q9D9V4 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Rsph9Q9D9V4 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rsph9Q9D9V4 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rsph9Q9D9V4 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.58■□□□□ 0.89
Rsph9Q9D9V4 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.58■□□□□ 0.89
Rsph9Q9D9V4 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rsph9Q9D9V4 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Rsph9Q9D9V4 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Rsph9Q9D9V4 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rsph9Q9D9V4 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.57■□□□□ 0.88
Rsph9Q9D9V4 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rsph9Q9D9V4 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rsph9Q9D9V4 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Rsph9Q9D9V4 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.57■□□□□ 0.88
Rsph9Q9D9V4 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Rsph9Q9D9V4 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.57■□□□□ 0.88
Rsph9Q9D9V4 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rsph9Q9D9V4 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rsph9Q9D9V4 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.57■□□□□ 0.88
Rsph9Q9D9V4 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rsph9Q9D9V4 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rsph9Q9D9V4 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.56■□□□□ 0.88
Rsph9Q9D9V4 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rsph9Q9D9V4 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rsph9Q9D9V4 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Rsph9Q9D9V4 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rsph9Q9D9V4 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rsph9Q9D9V4 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rsph9Q9D9V4 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rsph9Q9D9V4 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rsph9Q9D9V4 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rsph9Q9D9V4 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rsph9Q9D9V4 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rsph9Q9D9V4 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rsph9Q9D9V4 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rsph9Q9D9V4 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rsph9Q9D9V4 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rsph9Q9D9V4 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.54■□□□□ 0.88
Rsph9Q9D9V4 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rsph9Q9D9V4 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rsph9Q9D9V4 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rsph9Q9D9V4 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rsph9Q9D9V4 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Rsph9Q9D9V4 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rsph9Q9D9V4 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Rsph9Q9D9V4 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rsph9Q9D9V4 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
Rsph9Q9D9V4 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rsph9Q9D9V4 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rsph9Q9D9V4 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
Rsph9Q9D9V4 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rsph9Q9D9V4 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Rsph9Q9D9V4 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.53■□□□□ 0.88
Rsph9Q9D9V4 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
Rsph9Q9D9V4 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Rsph9Q9D9V4 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rsph9Q9D9V4 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Rsph9Q9D9V4 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rsph9Q9D9V4 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.53■□□□□ 0.88
Rsph9Q9D9V4 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rsph9Q9D9V4 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Rsph9Q9D9V4 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Rsph9Q9D9V4 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Rsph9Q9D9V4 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rsph9Q9D9V4 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rsph9Q9D9V4 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.52■□□□□ 0.88
Rsph9Q9D9V4 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rsph9Q9D9V4 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rsph9Q9D9V4 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rsph9Q9D9V4 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rsph9Q9D9V4 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rsph9Q9D9V4 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rsph9Q9D9V4 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.51■□□□□ 0.87
Rsph9Q9D9V4 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rsph9Q9D9V4 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.51■□□□□ 0.87
Rsph9Q9D9V4 Gm9847-201ENSMUST00000052528 599 ntBASIC20.51■□□□□ 0.87
Rsph9Q9D9V4 Gm13241-201ENSMUST00000094493 780 ntBASIC20.51■□□□□ 0.87
Rsph9Q9D9V4 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rsph9Q9D9V4 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Rsph9Q9D9V4 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
Rsph9Q9D9V4 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rsph9Q9D9V4 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.5■□□□□ 0.87
Rsph9Q9D9V4 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rsph9Q9D9V4 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rsph9Q9D9V4 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rsph9Q9D9V4 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rsph9Q9D9V4 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rsph9Q9D9V4 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rsph9Q9D9V4 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rsph9Q9D9V4 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.49■□□□□ 0.87
Rsph9Q9D9V4 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rsph9Q9D9V4 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rsph9Q9D9V4 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rsph9Q9D9V4 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.48■□□□□ 0.87
Rsph9Q9D9V4 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rsph9Q9D9V4 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms