Protein–RNA interactions for Protein: Q9D6I0

Rtl8c, Cxx1c protein, mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl8cQ9D6I0 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rtl8cQ9D6I0 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.82■□□□□ 0.6
Rtl8cQ9D6I0 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rtl8cQ9D6I0 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rtl8cQ9D6I0 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rtl8cQ9D6I0 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rtl8cQ9D6I0 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rtl8cQ9D6I0 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.82■□□□□ 0.6
Rtl8cQ9D6I0 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtl8cQ9D6I0 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtl8cQ9D6I0 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtl8cQ9D6I0 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtl8cQ9D6I0 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtl8cQ9D6I0 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtl8cQ9D6I0 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rtl8cQ9D6I0 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.8■□□□□ 0.6
Rtl8cQ9D6I0 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rtl8cQ9D6I0 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rtl8cQ9D6I0 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.8■□□□□ 0.6
Rtl8cQ9D6I0 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.8■□□□□ 0.6
Rtl8cQ9D6I0 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rtl8cQ9D6I0 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Rtl8cQ9D6I0 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rtl8cQ9D6I0 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rtl8cQ9D6I0 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rtl8cQ9D6I0 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.79■□□□□ 0.6
Rtl8cQ9D6I0 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.79■□□□□ 0.6
Rtl8cQ9D6I0 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rtl8cQ9D6I0 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Rtl8cQ9D6I0 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Rtl8cQ9D6I0 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtl8cQ9D6I0 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtl8cQ9D6I0 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Rtl8cQ9D6I0 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtl8cQ9D6I0 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.78■□□□□ 0.6
Rtl8cQ9D6I0 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rtl8cQ9D6I0 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Rtl8cQ9D6I0 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtl8cQ9D6I0 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rtl8cQ9D6I0 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Rtl8cQ9D6I0 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.77■□□□□ 0.6
Rtl8cQ9D6I0 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rtl8cQ9D6I0 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rtl8cQ9D6I0 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rtl8cQ9D6I0 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rtl8cQ9D6I0 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rtl8cQ9D6I0 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rtl8cQ9D6I0 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rtl8cQ9D6I0 Gm45444-201ENSMUST00000211394 898 ntBASIC18.77■□□□□ 0.6
Rtl8cQ9D6I0 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.77■□□□□ 0.6
Rtl8cQ9D6I0 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rtl8cQ9D6I0 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rtl8cQ9D6I0 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
Rtl8cQ9D6I0 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtl8cQ9D6I0 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtl8cQ9D6I0 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtl8cQ9D6I0 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rtl8cQ9D6I0 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.76■□□□□ 0.59
Rtl8cQ9D6I0 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.76■□□□□ 0.59
Rtl8cQ9D6I0 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtl8cQ9D6I0 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Rtl8cQ9D6I0 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtl8cQ9D6I0 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtl8cQ9D6I0 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtl8cQ9D6I0 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Rtl8cQ9D6I0 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rtl8cQ9D6I0 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rtl8cQ9D6I0 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rtl8cQ9D6I0 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.75■□□□□ 0.59
Rtl8cQ9D6I0 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rtl8cQ9D6I0 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rtl8cQ9D6I0 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rtl8cQ9D6I0 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rtl8cQ9D6I0 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Rtl8cQ9D6I0 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtl8cQ9D6I0 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtl8cQ9D6I0 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.74■□□□□ 0.59
Rtl8cQ9D6I0 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtl8cQ9D6I0 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rtl8cQ9D6I0 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.74■□□□□ 0.59
Rtl8cQ9D6I0 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.74■□□□□ 0.59
Rtl8cQ9D6I0 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtl8cQ9D6I0 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtl8cQ9D6I0 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtl8cQ9D6I0 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtl8cQ9D6I0 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtl8cQ9D6I0 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rtl8cQ9D6I0 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rtl8cQ9D6I0 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rtl8cQ9D6I0 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rtl8cQ9D6I0 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Rtl8cQ9D6I0 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rtl8cQ9D6I0 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.73■□□□□ 0.59
Rtl8cQ9D6I0 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rtl8cQ9D6I0 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rtl8cQ9D6I0 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rtl8cQ9D6I0 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Rtl8cQ9D6I0 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Rtl8cQ9D6I0 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rtl8cQ9D6I0 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms