Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
Khdc3Q9CWU5 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Khdc3Q9CWU5 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
Khdc3Q9CWU5 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Khdc3Q9CWU5 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Khdc3Q9CWU5 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Khdc3Q9CWU5 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.14■□□□□ 0.81
Khdc3Q9CWU5 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Khdc3Q9CWU5 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Khdc3Q9CWU5 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.14■□□□□ 0.81
Khdc3Q9CWU5 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Khdc3Q9CWU5 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Khdc3Q9CWU5 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Khdc3Q9CWU5 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Khdc3Q9CWU5 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.14■□□□□ 0.81
Khdc3Q9CWU5 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Khdc3Q9CWU5 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Khdc3Q9CWU5 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Khdc3Q9CWU5 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Khdc3Q9CWU5 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Khdc3Q9CWU5 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Khdc3Q9CWU5 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.13■□□□□ 0.81
Khdc3Q9CWU5 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.13■□□□□ 0.81
Khdc3Q9CWU5 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Khdc3Q9CWU5 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Khdc3Q9CWU5 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Khdc3Q9CWU5 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Khdc3Q9CWU5 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Khdc3Q9CWU5 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Khdc3Q9CWU5 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.12■□□□□ 0.81
Khdc3Q9CWU5 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.12■□□□□ 0.81
Khdc3Q9CWU5 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.12■□□□□ 0.81
Khdc3Q9CWU5 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Khdc3Q9CWU5 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Khdc3Q9CWU5 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Khdc3Q9CWU5 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.12■□□□□ 0.81
Khdc3Q9CWU5 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Khdc3Q9CWU5 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Khdc3Q9CWU5 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.11■□□□□ 0.81
Khdc3Q9CWU5 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Khdc3Q9CWU5 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.11■□□□□ 0.81
Khdc3Q9CWU5 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.1■□□□□ 0.81
Khdc3Q9CWU5 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Khdc3Q9CWU5 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Khdc3Q9CWU5 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Khdc3Q9CWU5 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Khdc3Q9CWU5 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Khdc3Q9CWU5 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Khdc3Q9CWU5 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Khdc3Q9CWU5 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Khdc3Q9CWU5 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Khdc3Q9CWU5 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Khdc3Q9CWU5 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Khdc3Q9CWU5 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Khdc3Q9CWU5 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.09■□□□□ 0.81
Khdc3Q9CWU5 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Khdc3Q9CWU5 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Khdc3Q9CWU5 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Khdc3Q9CWU5 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
Khdc3Q9CWU5 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Khdc3Q9CWU5 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.08■□□□□ 0.81
Khdc3Q9CWU5 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Khdc3Q9CWU5 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Khdc3Q9CWU5 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Khdc3Q9CWU5 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Khdc3Q9CWU5 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Khdc3Q9CWU5 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Khdc3Q9CWU5 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Khdc3Q9CWU5 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.07■□□□□ 0.8
Khdc3Q9CWU5 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.07■□□□□ 0.8
Khdc3Q9CWU5 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.07■□□□□ 0.8
Khdc3Q9CWU5 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Khdc3Q9CWU5 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Khdc3Q9CWU5 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Khdc3Q9CWU5 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Khdc3Q9CWU5 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
Khdc3Q9CWU5 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Khdc3Q9CWU5 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Khdc3Q9CWU5 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Khdc3Q9CWU5 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Khdc3Q9CWU5 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.05■□□□□ 0.8
Khdc3Q9CWU5 Gm45444-201ENSMUST00000211394 898 ntBASIC20.05■□□□□ 0.8
Khdc3Q9CWU5 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Khdc3Q9CWU5 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.05■□□□□ 0.8
Khdc3Q9CWU5 Gm5921-201ENSMUST00000075898 882 ntBASIC20.05■□□□□ 0.8
Khdc3Q9CWU5 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Khdc3Q9CWU5 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Khdc3Q9CWU5 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Khdc3Q9CWU5 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Khdc3Q9CWU5 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.04■□□□□ 0.8
Khdc3Q9CWU5 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Khdc3Q9CWU5 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Khdc3Q9CWU5 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Khdc3Q9CWU5 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.03■□□□□ 0.8
Khdc3Q9CWU5 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Khdc3Q9CWU5 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Khdc3Q9CWU5 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Khdc3Q9CWU5 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Khdc3Q9CWU5 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Khdc3Q9CWU5 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 111.6 ms