Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdha2Q91Y17 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdha2Q91Y17 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdha2Q91Y17 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC22.63■■□□□ 1.21
Pcdha2Q91Y17 Gm10399-202ENSMUST00000202768 748 ntBASIC22.63■■□□□ 1.21
Pcdha2Q91Y17 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdha2Q91Y17 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdha2Q91Y17 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdha2Q91Y17 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC22.62■■□□□ 1.21
Pcdha2Q91Y17 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
Pcdha2Q91Y17 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdha2Q91Y17 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC22.62■■□□□ 1.21
Pcdha2Q91Y17 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC22.62■■□□□ 1.21
Pcdha2Q91Y17 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC22.62■■□□□ 1.21
Pcdha2Q91Y17 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdha2Q91Y17 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdha2Q91Y17 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdha2Q91Y17 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdha2Q91Y17 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdha2Q91Y17 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdha2Q91Y17 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdha2Q91Y17 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdha2Q91Y17 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdha2Q91Y17 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdha2Q91Y17 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdha2Q91Y17 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC22.6■■□□□ 1.21
Pcdha2Q91Y17 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC22.6■■□□□ 1.21
Pcdha2Q91Y17 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdha2Q91Y17 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdha2Q91Y17 Gm9959-201ENSMUST00000068277 390 ntBASIC22.6■■□□□ 1.21
Pcdha2Q91Y17 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdha2Q91Y17 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC22.59■■□□□ 1.21
Pcdha2Q91Y17 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Pcdha2Q91Y17 Dmtn-209ENSMUST00000228295 2572 ntBASIC22.59■■□□□ 1.21
Pcdha2Q91Y17 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
Pcdha2Q91Y17 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC22.58■■□□□ 1.21
Pcdha2Q91Y17 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Pcdha2Q91Y17 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Pcdha2Q91Y17 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Pcdha2Q91Y17 Gm40881-201ENSMUST00000223397 166 ntBASIC22.57■■□□□ 1.2
Pcdha2Q91Y17 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdha2Q91Y17 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdha2Q91Y17 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
Pcdha2Q91Y17 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdha2Q91Y17 AC164883.3-201ENSMUST00000227396 1774 ntBASIC22.56■■□□□ 1.2
Pcdha2Q91Y17 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Pcdha2Q91Y17 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC22.56■■□□□ 1.2
Pcdha2Q91Y17 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC22.56■■□□□ 1.2
Pcdha2Q91Y17 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC22.56■■□□□ 1.2
Pcdha2Q91Y17 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pcdha2Q91Y17 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Pcdha2Q91Y17 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pcdha2Q91Y17 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdha2Q91Y17 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdha2Q91Y17 Gm45102-201ENSMUST00000207427 857 ntBASIC22.55■■□□□ 1.2
Pcdha2Q91Y17 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdha2Q91Y17 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC22.55■■□□□ 1.2
Pcdha2Q91Y17 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdha2Q91Y17 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdha2Q91Y17 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdha2Q91Y17 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdha2Q91Y17 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Pcdha2Q91Y17 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdha2Q91Y17 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdha2Q91Y17 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdha2Q91Y17 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdha2Q91Y17 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdha2Q91Y17 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdha2Q91Y17 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdha2Q91Y17 Gm32051-202ENSMUST00000197905 2385 ntBASIC22.53■■□□□ 1.2
Pcdha2Q91Y17 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdha2Q91Y17 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC22.53■■□□□ 1.2
Pcdha2Q91Y17 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdha2Q91Y17 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdha2Q91Y17 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdha2Q91Y17 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdha2Q91Y17 Gm43403-201ENSMUST00000198011 1786 ntBASIC22.53■■□□□ 1.2
Pcdha2Q91Y17 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdha2Q91Y17 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdha2Q91Y17 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC22.52■■□□□ 1.2
Pcdha2Q91Y17 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Pcdha2Q91Y17 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdha2Q91Y17 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdha2Q91Y17 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
Pcdha2Q91Y17 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdha2Q91Y17 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Pcdha2Q91Y17 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC22.51■■□□□ 1.19
Pcdha2Q91Y17 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdha2Q91Y17 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdha2Q91Y17 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdha2Q91Y17 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdha2Q91Y17 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdha2Q91Y17 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdha2Q91Y17 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdha2Q91Y17 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC22.5■■□□□ 1.19
Pcdha2Q91Y17 Gm14117-201ENSMUST00000122417 843 ntBASIC22.5■■□□□ 1.19
Pcdha2Q91Y17 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdha2Q91Y17 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC22.5■■□□□ 1.19
Pcdha2Q91Y17 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdha2Q91Y17 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms