Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhb6Q91XZ4 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhb6Q91XZ4 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhb6Q91XZ4 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Pcdhb6Q91XZ4 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
Pcdhb6Q91XZ4 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhb6Q91XZ4 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhb6Q91XZ4 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhb6Q91XZ4 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhb6Q91XZ4 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Pcdhb6Q91XZ4 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
Pcdhb6Q91XZ4 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhb6Q91XZ4 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhb6Q91XZ4 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhb6Q91XZ4 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.73■■□□□ 1.07
Pcdhb6Q91XZ4 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
Pcdhb6Q91XZ4 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.73■■□□□ 1.07
Pcdhb6Q91XZ4 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhb6Q91XZ4 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb6Q91XZ4 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Pcdhb6Q91XZ4 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Pcdhb6Q91XZ4 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Pcdhb6Q91XZ4 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Pcdhb6Q91XZ4 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb6Q91XZ4 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb6Q91XZ4 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb6Q91XZ4 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
Pcdhb6Q91XZ4 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhb6Q91XZ4 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhb6Q91XZ4 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Pcdhb6Q91XZ4 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb6Q91XZ4 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb6Q91XZ4 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb6Q91XZ4 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb6Q91XZ4 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb6Q91XZ4 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.69■■□□□ 1.06
Pcdhb6Q91XZ4 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.69■■□□□ 1.06
Pcdhb6Q91XZ4 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Pcdhb6Q91XZ4 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.69■■□□□ 1.06
Pcdhb6Q91XZ4 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb6Q91XZ4 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhb6Q91XZ4 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhb6Q91XZ4 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhb6Q91XZ4 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhb6Q91XZ4 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.68■■□□□ 1.06
Pcdhb6Q91XZ4 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhb6Q91XZ4 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Pcdhb6Q91XZ4 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb6Q91XZ4 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb6Q91XZ4 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb6Q91XZ4 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.67■■□□□ 1.06
Pcdhb6Q91XZ4 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Pcdhb6Q91XZ4 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb6Q91XZ4 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb6Q91XZ4 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhb6Q91XZ4 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhb6Q91XZ4 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhb6Q91XZ4 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.66■■□□□ 1.06
Pcdhb6Q91XZ4 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhb6Q91XZ4 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhb6Q91XZ4 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.65■■□□□ 1.06
Pcdhb6Q91XZ4 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhb6Q91XZ4 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.65■■□□□ 1.06
Pcdhb6Q91XZ4 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.65■■□□□ 1.06
Pcdhb6Q91XZ4 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Pcdhb6Q91XZ4 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.65■■□□□ 1.06
Pcdhb6Q91XZ4 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhb6Q91XZ4 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhb6Q91XZ4 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Pcdhb6Q91XZ4 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Pcdhb6Q91XZ4 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhb6Q91XZ4 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhb6Q91XZ4 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhb6Q91XZ4 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Pcdhb6Q91XZ4 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhb6Q91XZ4 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.63■■□□□ 1.05
Pcdhb6Q91XZ4 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhb6Q91XZ4 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhb6Q91XZ4 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhb6Q91XZ4 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhb6Q91XZ4 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhb6Q91XZ4 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Pcdhb6Q91XZ4 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhb6Q91XZ4 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhb6Q91XZ4 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
Pcdhb6Q91XZ4 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhb6Q91XZ4 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhb6Q91XZ4 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb6Q91XZ4 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
Pcdhb6Q91XZ4 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb6Q91XZ4 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb6Q91XZ4 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Pcdhb6Q91XZ4 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb6Q91XZ4 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.6■■□□□ 1.05
Pcdhb6Q91XZ4 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb6Q91XZ4 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb6Q91XZ4 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb6Q91XZ4 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.6■■□□□ 1.05
Pcdhb6Q91XZ4 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.6■■□□□ 1.05
Pcdhb6Q91XZ4 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms