Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Pcdhga3Q91XY5 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.62■□□□□ 0.57
Pcdhga3Q91XY5 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhga3Q91XY5 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhga3Q91XY5 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Pcdhga3Q91XY5 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhga3Q91XY5 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhga3Q91XY5 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Pcdhga3Q91XY5 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.61■□□□□ 0.57
Pcdhga3Q91XY5 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhga3Q91XY5 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhga3Q91XY5 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.6■□□□□ 0.57
Pcdhga3Q91XY5 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhga3Q91XY5 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhga3Q91XY5 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.6■□□□□ 0.57
Pcdhga3Q91XY5 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC18.6■□□□□ 0.57
Pcdhga3Q91XY5 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhga3Q91XY5 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhga3Q91XY5 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhga3Q91XY5 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Pcdhga3Q91XY5 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
Pcdhga3Q91XY5 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Pcdhga3Q91XY5 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhga3Q91XY5 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhga3Q91XY5 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhga3Q91XY5 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhga3Q91XY5 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhga3Q91XY5 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Pcdhga3Q91XY5 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.59■□□□□ 0.57
Pcdhga3Q91XY5 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhga3Q91XY5 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhga3Q91XY5 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Pcdhga3Q91XY5 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhga3Q91XY5 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhga3Q91XY5 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhga3Q91XY5 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhga3Q91XY5 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhga3Q91XY5 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.58■□□□□ 0.57
Pcdhga3Q91XY5 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhga3Q91XY5 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.58■□□□□ 0.56
Pcdhga3Q91XY5 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.58■□□□□ 0.56
Pcdhga3Q91XY5 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhga3Q91XY5 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhga3Q91XY5 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Pcdhga3Q91XY5 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Pcdhga3Q91XY5 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.57■□□□□ 0.56
Pcdhga3Q91XY5 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhga3Q91XY5 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhga3Q91XY5 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
Pcdhga3Q91XY5 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhga3Q91XY5 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhga3Q91XY5 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Pcdhga3Q91XY5 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhga3Q91XY5 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.56■□□□□ 0.56
Pcdhga3Q91XY5 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhga3Q91XY5 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhga3Q91XY5 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhga3Q91XY5 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhga3Q91XY5 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Pcdhga3Q91XY5 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhga3Q91XY5 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhga3Q91XY5 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhga3Q91XY5 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhga3Q91XY5 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhga3Q91XY5 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhga3Q91XY5 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhga3Q91XY5 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.54■□□□□ 0.56
Pcdhga3Q91XY5 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhga3Q91XY5 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhga3Q91XY5 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhga3Q91XY5 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhga3Q91XY5 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.54■□□□□ 0.56
Pcdhga3Q91XY5 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhga3Q91XY5 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Pcdhga3Q91XY5 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhga3Q91XY5 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhga3Q91XY5 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.53■□□□□ 0.56
Pcdhga3Q91XY5 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhga3Q91XY5 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.53■□□□□ 0.56
Pcdhga3Q91XY5 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhga3Q91XY5 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhga3Q91XY5 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhga3Q91XY5 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhga3Q91XY5 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdhga3Q91XY5 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.52■□□□□ 0.55
Pcdhga3Q91XY5 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.52■□□□□ 0.55
Pcdhga3Q91XY5 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhga3Q91XY5 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.51■□□□□ 0.55
Pcdhga3Q91XY5 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhga3Q91XY5 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhga3Q91XY5 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhga3Q91XY5 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhga3Q91XY5 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Pcdhga3Q91XY5 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhga3Q91XY5 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.51■□□□□ 0.55
Pcdhga3Q91XY5 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhga3Q91XY5 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhga3Q91XY5 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Pcdhga3Q91XY5 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.51■□□□□ 0.55
Pcdhga3Q91XY5 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms