Protein–RNA interactions for Protein: Q91XD2

Lims2, LIM and senescent cell antigen-like-containing domain protein 2, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims2Q91XD2 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Lims2Q91XD2 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Lims2Q91XD2 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Lims2Q91XD2 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Lims2Q91XD2 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Lims2Q91XD2 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.81■■□□□ 1.08
Lims2Q91XD2 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.81■■□□□ 1.08
Lims2Q91XD2 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Lims2Q91XD2 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Lims2Q91XD2 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.8■■□□□ 1.08
Lims2Q91XD2 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.8■■□□□ 1.08
Lims2Q91XD2 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.8■■□□□ 1.08
Lims2Q91XD2 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Lims2Q91XD2 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Lims2Q91XD2 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Lims2Q91XD2 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Lims2Q91XD2 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Lims2Q91XD2 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Lims2Q91XD2 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Lims2Q91XD2 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.79■■□□□ 1.08
Lims2Q91XD2 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Lims2Q91XD2 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Lims2Q91XD2 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.79■■□□□ 1.08
Lims2Q91XD2 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.79■■□□□ 1.08
Lims2Q91XD2 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Lims2Q91XD2 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Lims2Q91XD2 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Lims2Q91XD2 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Lims2Q91XD2 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Lims2Q91XD2 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Lims2Q91XD2 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Lims2Q91XD2 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Lims2Q91XD2 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Lims2Q91XD2 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Lims2Q91XD2 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Lims2Q91XD2 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Lims2Q91XD2 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Lims2Q91XD2 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
Lims2Q91XD2 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Lims2Q91XD2 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Lims2Q91XD2 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Lims2Q91XD2 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Lims2Q91XD2 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Lims2Q91XD2 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Lims2Q91XD2 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
Lims2Q91XD2 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Lims2Q91XD2 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Lims2Q91XD2 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.75■■□□□ 1.07
Lims2Q91XD2 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Lims2Q91XD2 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Lims2Q91XD2 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Lims2Q91XD2 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.75■■□□□ 1.07
Lims2Q91XD2 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Lims2Q91XD2 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Lims2Q91XD2 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Lims2Q91XD2 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Lims2Q91XD2 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.74■■□□□ 1.07
Lims2Q91XD2 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Lims2Q91XD2 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Lims2Q91XD2 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Lims2Q91XD2 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.74■■□□□ 1.07
Lims2Q91XD2 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Lims2Q91XD2 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Lims2Q91XD2 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lims2Q91XD2 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Lims2Q91XD2 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lims2Q91XD2 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
Lims2Q91XD2 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.73■■□□□ 1.07
Lims2Q91XD2 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.73■■□□□ 1.07
Lims2Q91XD2 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.73■■□□□ 1.07
Lims2Q91XD2 Gm22238-201ENSMUST00000175222 88 ntBASIC21.73■■□□□ 1.07
Lims2Q91XD2 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Lims2Q91XD2 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lims2Q91XD2 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lims2Q91XD2 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lims2Q91XD2 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Lims2Q91XD2 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Lims2Q91XD2 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.72■■□□□ 1.07
Lims2Q91XD2 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Lims2Q91XD2 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.72■■□□□ 1.07
Lims2Q91XD2 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lims2Q91XD2 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.71■■□□□ 1.07
Lims2Q91XD2 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.71■■□□□ 1.07
Lims2Q91XD2 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lims2Q91XD2 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lims2Q91XD2 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.71■■□□□ 1.07
Lims2Q91XD2 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Lims2Q91XD2 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Lims2Q91XD2 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Lims2Q91XD2 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Lims2Q91XD2 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lims2Q91XD2 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lims2Q91XD2 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lims2Q91XD2 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Lims2Q91XD2 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Lims2Q91XD2 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lims2Q91XD2 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.69■■□□□ 1.06
Lims2Q91XD2 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lims2Q91XD2 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lims2Q91XD2 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms