Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdh18Q8VHR0 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdh18Q8VHR0 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdh18Q8VHR0 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdh18Q8VHR0 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Pcdh18Q8VHR0 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdh18Q8VHR0 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdh18Q8VHR0 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdh18Q8VHR0 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdh18Q8VHR0 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.1■□□□□ 0.81
Pcdh18Q8VHR0 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.1■□□□□ 0.81
Pcdh18Q8VHR0 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Pcdh18Q8VHR0 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdh18Q8VHR0 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdh18Q8VHR0 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdh18Q8VHR0 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdh18Q8VHR0 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdh18Q8VHR0 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdh18Q8VHR0 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdh18Q8VHR0 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Pcdh18Q8VHR0 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Pcdh18Q8VHR0 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdh18Q8VHR0 Gm11687-201ENSMUST00000118911 886 ntBASIC20.08■□□□□ 0.81
Pcdh18Q8VHR0 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Pcdh18Q8VHR0 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdh18Q8VHR0 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdh18Q8VHR0 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Pcdh18Q8VHR0 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.07■□□□□ 0.8
Pcdh18Q8VHR0 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdh18Q8VHR0 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdh18Q8VHR0 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdh18Q8VHR0 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdh18Q8VHR0 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Pcdh18Q8VHR0 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdh18Q8VHR0 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Pcdh18Q8VHR0 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdh18Q8VHR0 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.06■□□□□ 0.8
Pcdh18Q8VHR0 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Pcdh18Q8VHR0 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdh18Q8VHR0 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdh18Q8VHR0 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdh18Q8VHR0 Gm22567-201ENSMUST00000175542 342 ntBASIC20.05■□□□□ 0.8
Pcdh18Q8VHR0 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.05■□□□□ 0.8
Pcdh18Q8VHR0 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Pcdh18Q8VHR0 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.05■□□□□ 0.8
Pcdh18Q8VHR0 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdh18Q8VHR0 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Pcdh18Q8VHR0 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.05■□□□□ 0.8
Pcdh18Q8VHR0 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.05■□□□□ 0.8
Pcdh18Q8VHR0 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Pcdh18Q8VHR0 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdh18Q8VHR0 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.04■□□□□ 0.8
Pcdh18Q8VHR0 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.04■□□□□ 0.8
Pcdh18Q8VHR0 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.04■□□□□ 0.8
Pcdh18Q8VHR0 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdh18Q8VHR0 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdh18Q8VHR0 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdh18Q8VHR0 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdh18Q8VHR0 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Pcdh18Q8VHR0 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Pcdh18Q8VHR0 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdh18Q8VHR0 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdh18Q8VHR0 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Pcdh18Q8VHR0 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdh18Q8VHR0 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdh18Q8VHR0 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdh18Q8VHR0 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdh18Q8VHR0 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
Pcdh18Q8VHR0 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Pcdh18Q8VHR0 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdh18Q8VHR0 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdh18Q8VHR0 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdh18Q8VHR0 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdh18Q8VHR0 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdh18Q8VHR0 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdh18Q8VHR0 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdh18Q8VHR0 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdh18Q8VHR0 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdh18Q8VHR0 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pcdh18Q8VHR0 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Pcdh18Q8VHR0 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdh18Q8VHR0 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdh18Q8VHR0 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
Pcdh18Q8VHR0 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.99■□□□□ 0.79
Pcdh18Q8VHR0 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.99■□□□□ 0.79
Pcdh18Q8VHR0 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Pcdh18Q8VHR0 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdh18Q8VHR0 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdh18Q8VHR0 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdh18Q8VHR0 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdh18Q8VHR0 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdh18Q8VHR0 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Pcdh18Q8VHR0 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdh18Q8VHR0 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdh18Q8VHR0 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.98■□□□□ 0.79
Pcdh18Q8VHR0 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdh18Q8VHR0 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdh18Q8VHR0 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdh18Q8VHR0 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdh18Q8VHR0 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms