Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rab40cQ8VHQ4 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rab40cQ8VHQ4 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Rab40cQ8VHQ4 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab40cQ8VHQ4 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab40cQ8VHQ4 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Rab40cQ8VHQ4 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab40cQ8VHQ4 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab40cQ8VHQ4 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rab40cQ8VHQ4 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab40cQ8VHQ4 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab40cQ8VHQ4 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.11■□□□□ 0.33
Rab40cQ8VHQ4 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab40cQ8VHQ4 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab40cQ8VHQ4 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.11■□□□□ 0.33
Rab40cQ8VHQ4 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab40cQ8VHQ4 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab40cQ8VHQ4 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab40cQ8VHQ4 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab40cQ8VHQ4 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rab40cQ8VHQ4 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rab40cQ8VHQ4 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab40cQ8VHQ4 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab40cQ8VHQ4 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rab40cQ8VHQ4 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Rab40cQ8VHQ4 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.1■□□□□ 0.33
Rab40cQ8VHQ4 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab40cQ8VHQ4 Gm11599-201ENSMUST00000118720 878 ntBASIC17.09■□□□□ 0.33
Rab40cQ8VHQ4 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab40cQ8VHQ4 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab40cQ8VHQ4 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab40cQ8VHQ4 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rab40cQ8VHQ4 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Rab40cQ8VHQ4 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab40cQ8VHQ4 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Rab40cQ8VHQ4 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Rab40cQ8VHQ4 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rab40cQ8VHQ4 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rab40cQ8VHQ4 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Rab40cQ8VHQ4 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rab40cQ8VHQ4 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Rab40cQ8VHQ4 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Rab40cQ8VHQ4 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rab40cQ8VHQ4 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rab40cQ8VHQ4 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rab40cQ8VHQ4 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab40cQ8VHQ4 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab40cQ8VHQ4 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.07■□□□□ 0.32
Rab40cQ8VHQ4 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab40cQ8VHQ4 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rab40cQ8VHQ4 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Rab40cQ8VHQ4 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab40cQ8VHQ4 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab40cQ8VHQ4 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.07■□□□□ 0.32
Rab40cQ8VHQ4 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rab40cQ8VHQ4 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Rab40cQ8VHQ4 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
Rab40cQ8VHQ4 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Rab40cQ8VHQ4 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.06■□□□□ 0.32
Rab40cQ8VHQ4 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rab40cQ8VHQ4 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rab40cQ8VHQ4 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rab40cQ8VHQ4 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rab40cQ8VHQ4 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rab40cQ8VHQ4 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rab40cQ8VHQ4 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rab40cQ8VHQ4 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Rab40cQ8VHQ4 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rab40cQ8VHQ4 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rab40cQ8VHQ4 Gm44428-201ENSMUST00000204474 874 ntBASIC17.05■□□□□ 0.32
Rab40cQ8VHQ4 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.05■□□□□ 0.32
Rab40cQ8VHQ4 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.05■□□□□ 0.32
Rab40cQ8VHQ4 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rab40cQ8VHQ4 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Rab40cQ8VHQ4 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rab40cQ8VHQ4 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Rab40cQ8VHQ4 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rab40cQ8VHQ4 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rab40cQ8VHQ4 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC17.04■□□□□ 0.32
Rab40cQ8VHQ4 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.04■□□□□ 0.32
Rab40cQ8VHQ4 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rab40cQ8VHQ4 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rab40cQ8VHQ4 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rab40cQ8VHQ4 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rab40cQ8VHQ4 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.03■□□□□ 0.32
Rab40cQ8VHQ4 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rab40cQ8VHQ4 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.03■□□□□ 0.32
Rab40cQ8VHQ4 Pkd1-207ENSMUST00000228550 1050 ntBASIC17.03■□□□□ 0.32
Rab40cQ8VHQ4 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rab40cQ8VHQ4 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rab40cQ8VHQ4 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rab40cQ8VHQ4 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Rab40cQ8VHQ4 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rab40cQ8VHQ4 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rab40cQ8VHQ4 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.02■□□□□ 0.32
Rab40cQ8VHQ4 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rab40cQ8VHQ4 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
Rab40cQ8VHQ4 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rab40cQ8VHQ4 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rab40cQ8VHQ4 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.02■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms