Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Vps39Q8R5L3 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.05■□□□□ 0.96
Vps39Q8R5L3 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Vps39Q8R5L3 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Vps39Q8R5L3 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.05■□□□□ 0.96
Vps39Q8R5L3 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Vps39Q8R5L3 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Vps39Q8R5L3 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Vps39Q8R5L3 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Vps39Q8R5L3 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Vps39Q8R5L3 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.04■□□□□ 0.96
Vps39Q8R5L3 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.04■□□□□ 0.96
Vps39Q8R5L3 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Vps39Q8R5L3 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Vps39Q8R5L3 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Vps39Q8R5L3 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
Vps39Q8R5L3 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Vps39Q8R5L3 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Vps39Q8R5L3 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.03■□□□□ 0.96
Vps39Q8R5L3 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Vps39Q8R5L3 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Vps39Q8R5L3 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Vps39Q8R5L3 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.03■□□□□ 0.96
Vps39Q8R5L3 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.03■□□□□ 0.96
Vps39Q8R5L3 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.03■□□□□ 0.96
Vps39Q8R5L3 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Vps39Q8R5L3 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Vps39Q8R5L3 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Vps39Q8R5L3 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Vps39Q8R5L3 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Vps39Q8R5L3 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Vps39Q8R5L3 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Vps39Q8R5L3 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Vps39Q8R5L3 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Vps39Q8R5L3 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Vps39Q8R5L3 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Vps39Q8R5L3 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Vps39Q8R5L3 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Vps39Q8R5L3 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Vps39Q8R5L3 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Vps39Q8R5L3 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Vps39Q8R5L3 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Vps39Q8R5L3 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Vps39Q8R5L3 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21■□□□□ 0.95
Vps39Q8R5L3 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
Vps39Q8R5L3 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Vps39Q8R5L3 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Vps39Q8R5L3 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Vps39Q8R5L3 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Vps39Q8R5L3 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Vps39Q8R5L3 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Vps39Q8R5L3 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Vps39Q8R5L3 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Vps39Q8R5L3 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Vps39Q8R5L3 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.99■□□□□ 0.95
Vps39Q8R5L3 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Vps39Q8R5L3 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Vps39Q8R5L3 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.99■□□□□ 0.95
Vps39Q8R5L3 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Vps39Q8R5L3 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Vps39Q8R5L3 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Vps39Q8R5L3 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Vps39Q8R5L3 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Vps39Q8R5L3 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Vps39Q8R5L3 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Vps39Q8R5L3 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Vps39Q8R5L3 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Vps39Q8R5L3 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Vps39Q8R5L3 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Vps39Q8R5L3 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Vps39Q8R5L3 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Vps39Q8R5L3 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Vps39Q8R5L3 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Vps39Q8R5L3 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Vps39Q8R5L3 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Vps39Q8R5L3 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.97■□□□□ 0.95
Vps39Q8R5L3 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Vps39Q8R5L3 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Vps39Q8R5L3 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Vps39Q8R5L3 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Vps39Q8R5L3 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
Vps39Q8R5L3 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Vps39Q8R5L3 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
Vps39Q8R5L3 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Vps39Q8R5L3 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.95■□□□□ 0.94
Vps39Q8R5L3 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.95■□□□□ 0.94
Vps39Q8R5L3 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Vps39Q8R5L3 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Vps39Q8R5L3 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Vps39Q8R5L3 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.95■□□□□ 0.94
Vps39Q8R5L3 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Vps39Q8R5L3 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Vps39Q8R5L3 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Vps39Q8R5L3 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.95■□□□□ 0.94
Vps39Q8R5L3 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Vps39Q8R5L3 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vps39Q8R5L3 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Vps39Q8R5L3 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.94■□□□□ 0.94
Vps39Q8R5L3 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Vps39Q8R5L3 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms