Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Chrna3Q8R4G9 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chrna3Q8R4G9 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Chrna3Q8R4G9 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chrna3Q8R4G9 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chrna3Q8R4G9 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.65■□□□□ 0.9
Chrna3Q8R4G9 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chrna3Q8R4G9 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Chrna3Q8R4G9 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Chrna3Q8R4G9 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Chrna3Q8R4G9 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Chrna3Q8R4G9 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Chrna3Q8R4G9 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Chrna3Q8R4G9 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chrna3Q8R4G9 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Chrna3Q8R4G9 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.64■□□□□ 0.89
Chrna3Q8R4G9 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chrna3Q8R4G9 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.64■□□□□ 0.89
Chrna3Q8R4G9 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chrna3Q8R4G9 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.64■□□□□ 0.89
Chrna3Q8R4G9 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
Chrna3Q8R4G9 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chrna3Q8R4G9 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Chrna3Q8R4G9 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.63■□□□□ 0.89
Chrna3Q8R4G9 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chrna3Q8R4G9 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chrna3Q8R4G9 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chrna3Q8R4G9 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chrna3Q8R4G9 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Chrna3Q8R4G9 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.62■□□□□ 0.89
Chrna3Q8R4G9 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.62■□□□□ 0.89
Chrna3Q8R4G9 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.62■□□□□ 0.89
Chrna3Q8R4G9 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.62■□□□□ 0.89
Chrna3Q8R4G9 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Chrna3Q8R4G9 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.62■□□□□ 0.89
Chrna3Q8R4G9 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chrna3Q8R4G9 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chrna3Q8R4G9 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chrna3Q8R4G9 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Chrna3Q8R4G9 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chrna3Q8R4G9 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Chrna3Q8R4G9 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Chrna3Q8R4G9 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chrna3Q8R4G9 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chrna3Q8R4G9 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chrna3Q8R4G9 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chrna3Q8R4G9 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.6■□□□□ 0.89
Chrna3Q8R4G9 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Chrna3Q8R4G9 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
Chrna3Q8R4G9 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Chrna3Q8R4G9 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chrna3Q8R4G9 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chrna3Q8R4G9 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chrna3Q8R4G9 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.6■□□□□ 0.89
Chrna3Q8R4G9 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.6■□□□□ 0.89
Chrna3Q8R4G9 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Chrna3Q8R4G9 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Chrna3Q8R4G9 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Chrna3Q8R4G9 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chrna3Q8R4G9 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chrna3Q8R4G9 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chrna3Q8R4G9 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chrna3Q8R4G9 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chrna3Q8R4G9 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chrna3Q8R4G9 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Chrna3Q8R4G9 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Chrna3Q8R4G9 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Chrna3Q8R4G9 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Chrna3Q8R4G9 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chrna3Q8R4G9 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.57■□□□□ 0.88
Chrna3Q8R4G9 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.57■□□□□ 0.88
Chrna3Q8R4G9 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chrna3Q8R4G9 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chrna3Q8R4G9 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Chrna3Q8R4G9 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chrna3Q8R4G9 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chrna3Q8R4G9 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Chrna3Q8R4G9 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chrna3Q8R4G9 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chrna3Q8R4G9 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chrna3Q8R4G9 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chrna3Q8R4G9 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chrna3Q8R4G9 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chrna3Q8R4G9 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Chrna3Q8R4G9 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.55■□□□□ 0.88
Chrna3Q8R4G9 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Chrna3Q8R4G9 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.55■□□□□ 0.88
Chrna3Q8R4G9 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Chrna3Q8R4G9 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chrna3Q8R4G9 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.54■□□□□ 0.88
Chrna3Q8R4G9 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Chrna3Q8R4G9 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.54■□□□□ 0.88
Chrna3Q8R4G9 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chrna3Q8R4G9 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Chrna3Q8R4G9 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chrna3Q8R4G9 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Chrna3Q8R4G9 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chrna3Q8R4G9 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.53■□□□□ 0.88
Chrna3Q8R4G9 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.53■□□□□ 0.88
Chrna3Q8R4G9 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms