Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Slf1Q8R3P9 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.13■□□□□ 0.97
Slf1Q8R3P9 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Slf1Q8R3P9 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.12■□□□□ 0.97
Slf1Q8R3P9 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slf1Q8R3P9 Gm6311-201ENSMUST00000073790 878 ntBASIC21.12■□□□□ 0.97
Slf1Q8R3P9 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slf1Q8R3P9 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slf1Q8R3P9 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
Slf1Q8R3P9 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slf1Q8R3P9 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Slf1Q8R3P9 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Slf1Q8R3P9 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Slf1Q8R3P9 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Slf1Q8R3P9 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Slf1Q8R3P9 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Slf1Q8R3P9 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Slf1Q8R3P9 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Slf1Q8R3P9 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.11■□□□□ 0.97
Slf1Q8R3P9 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Slf1Q8R3P9 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Slf1Q8R3P9 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Slf1Q8R3P9 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
Slf1Q8R3P9 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Slf1Q8R3P9 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.1■□□□□ 0.97
Slf1Q8R3P9 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Slf1Q8R3P9 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.1■□□□□ 0.97
Slf1Q8R3P9 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Slf1Q8R3P9 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Slf1Q8R3P9 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Slf1Q8R3P9 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.1■□□□□ 0.97
Slf1Q8R3P9 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.09■□□□□ 0.97
Slf1Q8R3P9 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
Slf1Q8R3P9 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slf1Q8R3P9 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slf1Q8R3P9 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Slf1Q8R3P9 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slf1Q8R3P9 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slf1Q8R3P9 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Slf1Q8R3P9 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Slf1Q8R3P9 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Slf1Q8R3P9 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.96
Slf1Q8R3P9 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
Slf1Q8R3P9 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Slf1Q8R3P9 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Slf1Q8R3P9 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Slf1Q8R3P9 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slf1Q8R3P9 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.06■□□□□ 0.96
Slf1Q8R3P9 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slf1Q8R3P9 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slf1Q8R3P9 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.06■□□□□ 0.96
Slf1Q8R3P9 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slf1Q8R3P9 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC21.06■□□□□ 0.96
Slf1Q8R3P9 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slf1Q8R3P9 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slf1Q8R3P9 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Slf1Q8R3P9 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Slf1Q8R3P9 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Slf1Q8R3P9 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Slf1Q8R3P9 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Slf1Q8R3P9 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.04■□□□□ 0.96
Slf1Q8R3P9 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Slf1Q8R3P9 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Slf1Q8R3P9 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Slf1Q8R3P9 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Slf1Q8R3P9 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Slf1Q8R3P9 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Slf1Q8R3P9 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Slf1Q8R3P9 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Slf1Q8R3P9 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Slf1Q8R3P9 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Slf1Q8R3P9 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Slf1Q8R3P9 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Slf1Q8R3P9 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.02■□□□□ 0.96
Slf1Q8R3P9 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.02■□□□□ 0.96
Slf1Q8R3P9 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Slf1Q8R3P9 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.02■□□□□ 0.96
Slf1Q8R3P9 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Slf1Q8R3P9 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Slf1Q8R3P9 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Slf1Q8R3P9 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Slf1Q8R3P9 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Slf1Q8R3P9 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Slf1Q8R3P9 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
Slf1Q8R3P9 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Slf1Q8R3P9 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Slf1Q8R3P9 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Slf1Q8R3P9 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Slf1Q8R3P9 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Slf1Q8R3P9 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.01■□□□□ 0.95
Slf1Q8R3P9 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.01■□□□□ 0.95
Slf1Q8R3P9 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Slf1Q8R3P9 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Slf1Q8R3P9 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Slf1Q8R3P9 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Slf1Q8R3P9 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Slf1Q8R3P9 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Slf1Q8R3P9 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Slf1Q8R3P9 Gm5112-201ENSMUST00000204407 2368 ntBASIC21■□□□□ 0.95
Slf1Q8R3P9 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 172.6 ms