Protein–RNA interactions for Protein: Q8R2B6

Vmn1r178, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 304 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r178Q8R2B6 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vmn1r178Q8R2B6 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Vmn1r178Q8R2B6 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Vmn1r178Q8R2B6 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Vmn1r178Q8R2B6 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Vmn1r178Q8R2B6 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Vmn1r178Q8R2B6 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vmn1r178Q8R2B6 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Vmn1r178Q8R2B6 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vmn1r178Q8R2B6 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Vmn1r178Q8R2B6 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vmn1r178Q8R2B6 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Vmn1r178Q8R2B6 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Vmn1r178Q8R2B6 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Vmn1r178Q8R2B6 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vmn1r178Q8R2B6 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vmn1r178Q8R2B6 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vmn1r178Q8R2B6 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vmn1r178Q8R2B6 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vmn1r178Q8R2B6 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vmn1r178Q8R2B6 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vmn1r178Q8R2B6 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vmn1r178Q8R2B6 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vmn1r178Q8R2B6 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vmn1r178Q8R2B6 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vmn1r178Q8R2B6 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Vmn1r178Q8R2B6 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vmn1r178Q8R2B6 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Vmn1r178Q8R2B6 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vmn1r178Q8R2B6 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vmn1r178Q8R2B6 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vmn1r178Q8R2B6 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vmn1r178Q8R2B6 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Vmn1r178Q8R2B6 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC17.54■□□□□ 0.4
Vmn1r178Q8R2B6 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vmn1r178Q8R2B6 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.54■□□□□ 0.4
Vmn1r178Q8R2B6 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vmn1r178Q8R2B6 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.54■□□□□ 0.4
Vmn1r178Q8R2B6 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vmn1r178Q8R2B6 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vmn1r178Q8R2B6 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.54■□□□□ 0.4
Vmn1r178Q8R2B6 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vmn1r178Q8R2B6 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC17.54■□□□□ 0.4
Vmn1r178Q8R2B6 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vmn1r178Q8R2B6 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vmn1r178Q8R2B6 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vmn1r178Q8R2B6 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vmn1r178Q8R2B6 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vmn1r178Q8R2B6 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Vmn1r178Q8R2B6 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vmn1r178Q8R2B6 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vmn1r178Q8R2B6 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vmn1r178Q8R2B6 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vmn1r178Q8R2B6 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vmn1r178Q8R2B6 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vmn1r178Q8R2B6 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vmn1r178Q8R2B6 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Vmn1r178Q8R2B6 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC17.52■□□□□ 0.4
Vmn1r178Q8R2B6 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.52■□□□□ 0.4
Vmn1r178Q8R2B6 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vmn1r178Q8R2B6 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Vmn1r178Q8R2B6 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Vmn1r178Q8R2B6 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC17.51■□□□□ 0.39
Vmn1r178Q8R2B6 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Vmn1r178Q8R2B6 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Vmn1r178Q8R2B6 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vmn1r178Q8R2B6 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vmn1r178Q8R2B6 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vmn1r178Q8R2B6 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Vmn1r178Q8R2B6 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Vmn1r178Q8R2B6 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Vmn1r178Q8R2B6 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Vmn1r178Q8R2B6 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Vmn1r178Q8R2B6 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vmn1r178Q8R2B6 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.5■□□□□ 0.39
Vmn1r178Q8R2B6 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Vmn1r178Q8R2B6 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Vmn1r178Q8R2B6 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vmn1r178Q8R2B6 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vmn1r178Q8R2B6 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vmn1r178Q8R2B6 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vmn1r178Q8R2B6 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vmn1r178Q8R2B6 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vmn1r178Q8R2B6 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Vmn1r178Q8R2B6 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC17.49■□□□□ 0.39
Vmn1r178Q8R2B6 Gm6311-201ENSMUST00000073790 878 ntBASIC17.49■□□□□ 0.39
Vmn1r178Q8R2B6 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vmn1r178Q8R2B6 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vmn1r178Q8R2B6 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vmn1r178Q8R2B6 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Vmn1r178Q8R2B6 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vmn1r178Q8R2B6 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vmn1r178Q8R2B6 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vmn1r178Q8R2B6 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Vmn1r178Q8R2B6 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Vmn1r178Q8R2B6 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vmn1r178Q8R2B6 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Vmn1r178Q8R2B6 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Vmn1r178Q8R2B6 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vmn1r178Q8R2B6 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 425.9 ms