Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC25.79■■□□□ 1.72
Sf3a1Q8K4Z5 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Sf3a1Q8K4Z5 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
Sf3a1Q8K4Z5 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Sf3a1Q8K4Z5 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC25.78■■□□□ 1.72
Sf3a1Q8K4Z5 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Sf3a1Q8K4Z5 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Sf3a1Q8K4Z5 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Sf3a1Q8K4Z5 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Sf3a1Q8K4Z5 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Sf3a1Q8K4Z5 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Sf3a1Q8K4Z5 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC25.77■■□□□ 1.72
Sf3a1Q8K4Z5 AC116713.1-201ENSMUST00000215074 430 ntBASIC25.76■■□□□ 1.71
Sf3a1Q8K4Z5 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Sf3a1Q8K4Z5 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
Sf3a1Q8K4Z5 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
Sf3a1Q8K4Z5 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Sf3a1Q8K4Z5 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC25.75■■□□□ 1.71
Sf3a1Q8K4Z5 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
Sf3a1Q8K4Z5 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC25.75■■□□□ 1.71
Sf3a1Q8K4Z5 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC25.74■■□□□ 1.71
Sf3a1Q8K4Z5 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC25.74■■□□□ 1.71
Sf3a1Q8K4Z5 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Sf3a1Q8K4Z5 Gm42418-201ENSMUST00000182010 1831 ntBASIC25.74■■□□□ 1.71
Sf3a1Q8K4Z5 Gm26766-202ENSMUST00000227544 2347 ntBASIC25.74■■□□□ 1.71
Sf3a1Q8K4Z5 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Sf3a1Q8K4Z5 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC25.73■■□□□ 1.71
Sf3a1Q8K4Z5 Gm42501-201ENSMUST00000200220 1026 ntBASIC25.73■■□□□ 1.71
Sf3a1Q8K4Z5 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Sf3a1Q8K4Z5 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Sf3a1Q8K4Z5 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Sf3a1Q8K4Z5 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Sf3a1Q8K4Z5 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Sf3a1Q8K4Z5 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Sf3a1Q8K4Z5 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
Sf3a1Q8K4Z5 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Sf3a1Q8K4Z5 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Sf3a1Q8K4Z5 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Sf3a1Q8K4Z5 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Sf3a1Q8K4Z5 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Sf3a1Q8K4Z5 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Sf3a1Q8K4Z5 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC25.71■■□□□ 1.71
Sf3a1Q8K4Z5 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
Sf3a1Q8K4Z5 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Sf3a1Q8K4Z5 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Sf3a1Q8K4Z5 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Sf3a1Q8K4Z5 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Sf3a1Q8K4Z5 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Sf3a1Q8K4Z5 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
Sf3a1Q8K4Z5 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC25.69■■□□□ 1.7
Sf3a1Q8K4Z5 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Sf3a1Q8K4Z5 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC25.69■■□□□ 1.7
Sf3a1Q8K4Z5 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Sf3a1Q8K4Z5 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
Sf3a1Q8K4Z5 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Sf3a1Q8K4Z5 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
Sf3a1Q8K4Z5 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC25.68■■□□□ 1.7
Sf3a1Q8K4Z5 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Sf3a1Q8K4Z5 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Sf3a1Q8K4Z5 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Sf3a1Q8K4Z5 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Sf3a1Q8K4Z5 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
Sf3a1Q8K4Z5 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Sf3a1Q8K4Z5 Gm37415-201ENSMUST00000192265 2054 ntBASIC25.67■■□□□ 1.7
Sf3a1Q8K4Z5 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Sf3a1Q8K4Z5 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC25.66■■□□□ 1.7
Sf3a1Q8K4Z5 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
Sf3a1Q8K4Z5 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Sf3a1Q8K4Z5 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Sf3a1Q8K4Z5 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
Sf3a1Q8K4Z5 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC25.66■■□□□ 1.7
Sf3a1Q8K4Z5 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC25.66■■□□□ 1.7
Sf3a1Q8K4Z5 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Sf3a1Q8K4Z5 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Sf3a1Q8K4Z5 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
Sf3a1Q8K4Z5 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC25.65■■□□□ 1.7
Sf3a1Q8K4Z5 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Sf3a1Q8K4Z5 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC25.64■■□□□ 1.7
Sf3a1Q8K4Z5 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.7
Sf3a1Q8K4Z5 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC25.64■■□□□ 1.7
Sf3a1Q8K4Z5 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Sf3a1Q8K4Z5 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC25.64■■□□□ 1.7
Sf3a1Q8K4Z5 AC093043.1-201ENSMUST00000226700 898 ntBASIC25.64■■□□□ 1.7
Sf3a1Q8K4Z5 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Sf3a1Q8K4Z5 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
Sf3a1Q8K4Z5 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Sf3a1Q8K4Z5 Gm10399-202ENSMUST00000202768 748 ntBASIC25.63■■□□□ 1.69
Sf3a1Q8K4Z5 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
Sf3a1Q8K4Z5 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Sf3a1Q8K4Z5 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Sf3a1Q8K4Z5 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Sf3a1Q8K4Z5 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
Sf3a1Q8K4Z5 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC25.63■■□□□ 1.69
Sf3a1Q8K4Z5 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Sf3a1Q8K4Z5 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC25.62■■□□□ 1.69
Sf3a1Q8K4Z5 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Sf3a1Q8K4Z5 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Sf3a1Q8K4Z5 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Sf3a1Q8K4Z5 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Sf3a1Q8K4Z5 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Retrieved 100 of 76,532 protein–RNA pairs in 119.1 ms