Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clrn1Q8K445 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clrn1Q8K445 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
Clrn1Q8K445 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clrn1Q8K445 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clrn1Q8K445 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Clrn1Q8K445 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clrn1Q8K445 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clrn1Q8K445 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.86■□□□□ 0.77
Clrn1Q8K445 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clrn1Q8K445 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Clrn1Q8K445 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clrn1Q8K445 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clrn1Q8K445 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Clrn1Q8K445 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clrn1Q8K445 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.84■□□□□ 0.77
Clrn1Q8K445 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clrn1Q8K445 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Clrn1Q8K445 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Clrn1Q8K445 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
Clrn1Q8K445 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Clrn1Q8K445 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clrn1Q8K445 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Clrn1Q8K445 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clrn1Q8K445 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clrn1Q8K445 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clrn1Q8K445 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.83■□□□□ 0.77
Clrn1Q8K445 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.83■□□□□ 0.77
Clrn1Q8K445 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Clrn1Q8K445 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.83■□□□□ 0.76
Clrn1Q8K445 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Clrn1Q8K445 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Clrn1Q8K445 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.83■□□□□ 0.76
Clrn1Q8K445 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clrn1Q8K445 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clrn1Q8K445 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clrn1Q8K445 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Clrn1Q8K445 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Clrn1Q8K445 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Clrn1Q8K445 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Clrn1Q8K445 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Clrn1Q8K445 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Clrn1Q8K445 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clrn1Q8K445 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clrn1Q8K445 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clrn1Q8K445 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.81■□□□□ 0.76
Clrn1Q8K445 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Clrn1Q8K445 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.81■□□□□ 0.76
Clrn1Q8K445 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Clrn1Q8K445 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Clrn1Q8K445 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Clrn1Q8K445 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clrn1Q8K445 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
Clrn1Q8K445 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clrn1Q8K445 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clrn1Q8K445 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.8■□□□□ 0.76
Clrn1Q8K445 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clrn1Q8K445 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Clrn1Q8K445 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Clrn1Q8K445 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.8■□□□□ 0.76
Clrn1Q8K445 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Clrn1Q8K445 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clrn1Q8K445 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.8■□□□□ 0.76
Clrn1Q8K445 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.79■□□□□ 0.76
Clrn1Q8K445 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.79■□□□□ 0.76
Clrn1Q8K445 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clrn1Q8K445 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clrn1Q8K445 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Clrn1Q8K445 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clrn1Q8K445 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Clrn1Q8K445 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clrn1Q8K445 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clrn1Q8K445 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.78■□□□□ 0.76
Clrn1Q8K445 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clrn1Q8K445 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.78■□□□□ 0.76
Clrn1Q8K445 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.78■□□□□ 0.76
Clrn1Q8K445 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
Clrn1Q8K445 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clrn1Q8K445 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clrn1Q8K445 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clrn1Q8K445 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Clrn1Q8K445 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clrn1Q8K445 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Clrn1Q8K445 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clrn1Q8K445 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Clrn1Q8K445 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clrn1Q8K445 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clrn1Q8K445 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Clrn1Q8K445 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.76■□□□□ 0.75
Clrn1Q8K445 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Clrn1Q8K445 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Clrn1Q8K445 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clrn1Q8K445 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clrn1Q8K445 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.75■□□□□ 0.75
Clrn1Q8K445 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Clrn1Q8K445 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clrn1Q8K445 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clrn1Q8K445 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clrn1Q8K445 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clrn1Q8K445 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms