Protein–RNA interactions for Protein: Q8K021

Scamp1, Secretory carrier-associated membrane protein 1, mousemouse

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scamp1Q8K021 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scamp1Q8K021 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scamp1Q8K021 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Scamp1Q8K021 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Scamp1Q8K021 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Scamp1Q8K021 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Scamp1Q8K021 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Scamp1Q8K021 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.57■□□□□ 0.88
Scamp1Q8K021 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scamp1Q8K021 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.57■□□□□ 0.88
Scamp1Q8K021 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scamp1Q8K021 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Scamp1Q8K021 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scamp1Q8K021 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scamp1Q8K021 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scamp1Q8K021 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.56■□□□□ 0.88
Scamp1Q8K021 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Scamp1Q8K021 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Scamp1Q8K021 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Scamp1Q8K021 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Scamp1Q8K021 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Scamp1Q8K021 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scamp1Q8K021 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scamp1Q8K021 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scamp1Q8K021 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scamp1Q8K021 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scamp1Q8K021 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.55■□□□□ 0.88
Scamp1Q8K021 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scamp1Q8K021 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scamp1Q8K021 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scamp1Q8K021 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Scamp1Q8K021 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scamp1Q8K021 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scamp1Q8K021 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Scamp1Q8K021 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scamp1Q8K021 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.54■□□□□ 0.88
Scamp1Q8K021 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Scamp1Q8K021 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.53■□□□□ 0.88
Scamp1Q8K021 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scamp1Q8K021 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scamp1Q8K021 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scamp1Q8K021 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Scamp1Q8K021 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Scamp1Q8K021 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scamp1Q8K021 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.52■□□□□ 0.88
Scamp1Q8K021 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Scamp1Q8K021 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scamp1Q8K021 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scamp1Q8K021 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scamp1Q8K021 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scamp1Q8K021 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scamp1Q8K021 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.52■□□□□ 0.87
Scamp1Q8K021 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Scamp1Q8K021 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scamp1Q8K021 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Scamp1Q8K021 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scamp1Q8K021 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scamp1Q8K021 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scamp1Q8K021 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Scamp1Q8K021 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scamp1Q8K021 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.5■□□□□ 0.87
Scamp1Q8K021 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scamp1Q8K021 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.5■□□□□ 0.87
Scamp1Q8K021 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scamp1Q8K021 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
Scamp1Q8K021 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scamp1Q8K021 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scamp1Q8K021 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scamp1Q8K021 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Scamp1Q8K021 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Scamp1Q8K021 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Scamp1Q8K021 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.49■□□□□ 0.87
Scamp1Q8K021 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scamp1Q8K021 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scamp1Q8K021 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Scamp1Q8K021 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scamp1Q8K021 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.48■□□□□ 0.87
Scamp1Q8K021 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scamp1Q8K021 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scamp1Q8K021 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scamp1Q8K021 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.48■□□□□ 0.87
Scamp1Q8K021 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scamp1Q8K021 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scamp1Q8K021 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scamp1Q8K021 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scamp1Q8K021 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scamp1Q8K021 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Scamp1Q8K021 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scamp1Q8K021 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Scamp1Q8K021 Gm21956-201ENSMUST00000179946 522 ntBASIC20.47■□□□□ 0.87
Scamp1Q8K021 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.47■□□□□ 0.87
Scamp1Q8K021 Gm9847-201ENSMUST00000052528 599 ntBASIC20.47■□□□□ 0.87
Scamp1Q8K021 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scamp1Q8K021 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scamp1Q8K021 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Scamp1Q8K021 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scamp1Q8K021 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Scamp1Q8K021 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scamp1Q8K021 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scamp1Q8K021 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms