Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
Rtp1Q8C8C1 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC24.38■■□□□ 1.49
Rtp1Q8C8C1 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC24.38■■□□□ 1.49
Rtp1Q8C8C1 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Rtp1Q8C8C1 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Rtp1Q8C8C1 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Rtp1Q8C8C1 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Rtp1Q8C8C1 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Rtp1Q8C8C1 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Rtp1Q8C8C1 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC24.37■■□□□ 1.49
Rtp1Q8C8C1 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Rtp1Q8C8C1 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Rtp1Q8C8C1 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC24.37■■□□□ 1.49
Rtp1Q8C8C1 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Rtp1Q8C8C1 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC24.37■■□□□ 1.49
Rtp1Q8C8C1 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC24.37■■□□□ 1.49
Rtp1Q8C8C1 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC24.36■■□□□ 1.49
Rtp1Q8C8C1 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Rtp1Q8C8C1 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC24.36■■□□□ 1.49
Rtp1Q8C8C1 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Rtp1Q8C8C1 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC24.36■■□□□ 1.49
Rtp1Q8C8C1 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Rtp1Q8C8C1 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Rtp1Q8C8C1 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Rtp1Q8C8C1 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Rtp1Q8C8C1 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
Rtp1Q8C8C1 Gm7291-201ENSMUST00000199147 382 ntBASIC24.35■■□□□ 1.49
Rtp1Q8C8C1 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Rtp1Q8C8C1 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
Rtp1Q8C8C1 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Rtp1Q8C8C1 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Rtp1Q8C8C1 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC24.34■■□□□ 1.49
Rtp1Q8C8C1 AC112142.1-201ENSMUST00000228796 918 ntBASIC24.34■■□□□ 1.49
Rtp1Q8C8C1 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Rtp1Q8C8C1 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Rtp1Q8C8C1 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Rtp1Q8C8C1 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Rtp1Q8C8C1 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Rtp1Q8C8C1 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC24.33■■□□□ 1.49
Rtp1Q8C8C1 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Rtp1Q8C8C1 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Rtp1Q8C8C1 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Rtp1Q8C8C1 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Rtp1Q8C8C1 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Rtp1Q8C8C1 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Rtp1Q8C8C1 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Rtp1Q8C8C1 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Rtp1Q8C8C1 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Rtp1Q8C8C1 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
Rtp1Q8C8C1 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Rtp1Q8C8C1 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC24.32■■□□□ 1.48
Rtp1Q8C8C1 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Rtp1Q8C8C1 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
Rtp1Q8C8C1 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC24.31■■□□□ 1.48
Rtp1Q8C8C1 Gm8493-201ENSMUST00000196881 489 ntBASIC24.31■■□□□ 1.48
Rtp1Q8C8C1 Il17rd-202ENSMUST00000223942 2186 ntBASIC24.31■■□□□ 1.48
Rtp1Q8C8C1 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Rtp1Q8C8C1 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Rtp1Q8C8C1 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Rtp1Q8C8C1 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Rtp1Q8C8C1 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Rtp1Q8C8C1 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
Rtp1Q8C8C1 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Rtp1Q8C8C1 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Rtp1Q8C8C1 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Rtp1Q8C8C1 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Rtp1Q8C8C1 Gm6934-201ENSMUST00000194780 1905 ntBASIC24.29■■□□□ 1.48
Rtp1Q8C8C1 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Rtp1Q8C8C1 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Rtp1Q8C8C1 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
Rtp1Q8C8C1 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Rtp1Q8C8C1 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Rtp1Q8C8C1 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Rtp1Q8C8C1 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Rtp1Q8C8C1 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Rtp1Q8C8C1 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC24.28■■□□□ 1.48
Rtp1Q8C8C1 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Rtp1Q8C8C1 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC24.28■■□□□ 1.48
Rtp1Q8C8C1 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Rtp1Q8C8C1 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Rtp1Q8C8C1 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Rtp1Q8C8C1 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC24.27■■□□□ 1.48
Rtp1Q8C8C1 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC24.27■■□□□ 1.48
Rtp1Q8C8C1 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC24.26■■□□□ 1.47
Rtp1Q8C8C1 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Rtp1Q8C8C1 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Rtp1Q8C8C1 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Rtp1Q8C8C1 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
Rtp1Q8C8C1 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC24.25■■□□□ 1.47
Rtp1Q8C8C1 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Rtp1Q8C8C1 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Rtp1Q8C8C1 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Rtp1Q8C8C1 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Rtp1Q8C8C1 Gm9870-201ENSMUST00000063874 645 ntBASIC24.25■■□□□ 1.47
Rtp1Q8C8C1 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Rtp1Q8C8C1 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC24.25■■□□□ 1.47
Rtp1Q8C8C1 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
Rtp1Q8C8C1 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Rtp1Q8C8C1 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
Rtp1Q8C8C1 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms