Protein–RNA interactions for Protein: Q8C0Y0

Ppp4r4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, mousemouse

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp4r4Q8C0Y0 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ppp4r4Q8C0Y0 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ppp4r4Q8C0Y0 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ppp4r4Q8C0Y0 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ppp4r4Q8C0Y0 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ppp4r4Q8C0Y0 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ppp4r4Q8C0Y0 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Ppp4r4Q8C0Y0 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.16■□□□□ 0.98
Ppp4r4Q8C0Y0 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ppp4r4Q8C0Y0 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ppp4r4Q8C0Y0 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Ppp4r4Q8C0Y0 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ppp4r4Q8C0Y0 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ppp4r4Q8C0Y0 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ppp4r4Q8C0Y0 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ppp4r4Q8C0Y0 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ppp4r4Q8C0Y0 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ppp4r4Q8C0Y0 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ppp4r4Q8C0Y0 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ppp4r4Q8C0Y0 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ppp4r4Q8C0Y0 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.14■□□□□ 0.97
Ppp4r4Q8C0Y0 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ppp4r4Q8C0Y0 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Ppp4r4Q8C0Y0 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Ppp4r4Q8C0Y0 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ppp4r4Q8C0Y0 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ppp4r4Q8C0Y0 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ppp4r4Q8C0Y0 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ppp4r4Q8C0Y0 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.13■□□□□ 0.97
Ppp4r4Q8C0Y0 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Ppp4r4Q8C0Y0 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.13■□□□□ 0.97
Ppp4r4Q8C0Y0 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ppp4r4Q8C0Y0 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ppp4r4Q8C0Y0 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ppp4r4Q8C0Y0 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ppp4r4Q8C0Y0 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Ppp4r4Q8C0Y0 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Ppp4r4Q8C0Y0 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.12■□□□□ 0.97
Ppp4r4Q8C0Y0 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ppp4r4Q8C0Y0 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ppp4r4Q8C0Y0 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ppp4r4Q8C0Y0 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ppp4r4Q8C0Y0 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ppp4r4Q8C0Y0 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Ppp4r4Q8C0Y0 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.1■□□□□ 0.97
Ppp4r4Q8C0Y0 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ppp4r4Q8C0Y0 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Ppp4r4Q8C0Y0 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ppp4r4Q8C0Y0 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ppp4r4Q8C0Y0 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ppp4r4Q8C0Y0 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.1■□□□□ 0.97
Ppp4r4Q8C0Y0 Gm5812-201ENSMUST00000061073 957 ntBASIC21.1■□□□□ 0.97
Ppp4r4Q8C0Y0 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ppp4r4Q8C0Y0 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Ppp4r4Q8C0Y0 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ppp4r4Q8C0Y0 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ppp4r4Q8C0Y0 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Ppp4r4Q8C0Y0 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ppp4r4Q8C0Y0 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ppp4r4Q8C0Y0 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ppp4r4Q8C0Y0 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.09■□□□□ 0.97
Ppp4r4Q8C0Y0 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ppp4r4Q8C0Y0 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ppp4r4Q8C0Y0 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ppp4r4Q8C0Y0 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ppp4r4Q8C0Y0 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.09■□□□□ 0.97
Ppp4r4Q8C0Y0 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ppp4r4Q8C0Y0 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ppp4r4Q8C0Y0 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.08■□□□□ 0.96
Ppp4r4Q8C0Y0 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.08■□□□□ 0.96
Ppp4r4Q8C0Y0 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Ppp4r4Q8C0Y0 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC21.07■□□□□ 0.96
Ppp4r4Q8C0Y0 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ppp4r4Q8C0Y0 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.07■□□□□ 0.96
Ppp4r4Q8C0Y0 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.07■□□□□ 0.96
Ppp4r4Q8C0Y0 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ppp4r4Q8C0Y0 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ppp4r4Q8C0Y0 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ppp4r4Q8C0Y0 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Ppp4r4Q8C0Y0 Gm15546-201ENSMUST00000122095 826 ntBASIC21.06■□□□□ 0.96
Ppp4r4Q8C0Y0 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.06■□□□□ 0.96
Ppp4r4Q8C0Y0 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Ppp4r4Q8C0Y0 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.06■□□□□ 0.96
Ppp4r4Q8C0Y0 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ppp4r4Q8C0Y0 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
Ppp4r4Q8C0Y0 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ppp4r4Q8C0Y0 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ppp4r4Q8C0Y0 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ppp4r4Q8C0Y0 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ppp4r4Q8C0Y0 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.05■□□□□ 0.96
Ppp4r4Q8C0Y0 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.05■□□□□ 0.96
Ppp4r4Q8C0Y0 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.05■□□□□ 0.96
Ppp4r4Q8C0Y0 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Ppp4r4Q8C0Y0 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Ppp4r4Q8C0Y0 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ppp4r4Q8C0Y0 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ppp4r4Q8C0Y0 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ppp4r4Q8C0Y0 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ppp4r4Q8C0Y0 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
Ppp4r4Q8C0Y0 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms