Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.98■□□□□ 0.79
Cdk5rap1Q8BTW8 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cdk5rap1Q8BTW8 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cdk5rap1Q8BTW8 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.98■□□□□ 0.79
Cdk5rap1Q8BTW8 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.98■□□□□ 0.79
Cdk5rap1Q8BTW8 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.98■□□□□ 0.79
Cdk5rap1Q8BTW8 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cdk5rap1Q8BTW8 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdk5rap1Q8BTW8 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdk5rap1Q8BTW8 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdk5rap1Q8BTW8 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cdk5rap1Q8BTW8 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdk5rap1Q8BTW8 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.97■□□□□ 0.79
Cdk5rap1Q8BTW8 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Cdk5rap1Q8BTW8 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdk5rap1Q8BTW8 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cdk5rap1Q8BTW8 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdk5rap1Q8BTW8 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdk5rap1Q8BTW8 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cdk5rap1Q8BTW8 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cdk5rap1Q8BTW8 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cdk5rap1Q8BTW8 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cdk5rap1Q8BTW8 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cdk5rap1Q8BTW8 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cdk5rap1Q8BTW8 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Cdk5rap1Q8BTW8 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cdk5rap1Q8BTW8 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.95■□□□□ 0.78
Cdk5rap1Q8BTW8 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cdk5rap1Q8BTW8 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cdk5rap1Q8BTW8 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cdk5rap1Q8BTW8 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Cdk5rap1Q8BTW8 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cdk5rap1Q8BTW8 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cdk5rap1Q8BTW8 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cdk5rap1Q8BTW8 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cdk5rap1Q8BTW8 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Cdk5rap1Q8BTW8 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cdk5rap1Q8BTW8 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cdk5rap1Q8BTW8 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cdk5rap1Q8BTW8 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Cdk5rap1Q8BTW8 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdk5rap1Q8BTW8 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
Cdk5rap1Q8BTW8 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdk5rap1Q8BTW8 Gm9847-201ENSMUST00000052528 599 ntBASIC19.93■□□□□ 0.78
Cdk5rap1Q8BTW8 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Cdk5rap1Q8BTW8 Gm13241-201ENSMUST00000094493 780 ntBASIC19.93■□□□□ 0.78
Cdk5rap1Q8BTW8 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cdk5rap1Q8BTW8 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdk5rap1Q8BTW8 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdk5rap1Q8BTW8 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cdk5rap1Q8BTW8 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cdk5rap1Q8BTW8 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Cdk5rap1Q8BTW8 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cdk5rap1Q8BTW8 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.92■□□□□ 0.78
Cdk5rap1Q8BTW8 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.92■□□□□ 0.78
Cdk5rap1Q8BTW8 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.92■□□□□ 0.78
Cdk5rap1Q8BTW8 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cdk5rap1Q8BTW8 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cdk5rap1Q8BTW8 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cdk5rap1Q8BTW8 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cdk5rap1Q8BTW8 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cdk5rap1Q8BTW8 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cdk5rap1Q8BTW8 Gm12922-201ENSMUST00000120626 809 ntBASIC19.91■□□□□ 0.78
Cdk5rap1Q8BTW8 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.91■□□□□ 0.78
Cdk5rap1Q8BTW8 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Cdk5rap1Q8BTW8 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
Cdk5rap1Q8BTW8 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Cdk5rap1Q8BTW8 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Cdk5rap1Q8BTW8 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdk5rap1Q8BTW8 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdk5rap1Q8BTW8 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Cdk5rap1Q8BTW8 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Cdk5rap1Q8BTW8 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdk5rap1Q8BTW8 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdk5rap1Q8BTW8 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdk5rap1Q8BTW8 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdk5rap1Q8BTW8 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
Cdk5rap1Q8BTW8 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
Cdk5rap1Q8BTW8 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Cdk5rap1Q8BTW8 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
Cdk5rap1Q8BTW8 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.89■□□□□ 0.77
Cdk5rap1Q8BTW8 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cdk5rap1Q8BTW8 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.89■□□□□ 0.77
Cdk5rap1Q8BTW8 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cdk5rap1Q8BTW8 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cdk5rap1Q8BTW8 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cdk5rap1Q8BTW8 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cdk5rap1Q8BTW8 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cdk5rap1Q8BTW8 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cdk5rap1Q8BTW8 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdk5rap1Q8BTW8 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Cdk5rap1Q8BTW8 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdk5rap1Q8BTW8 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.88■□□□□ 0.77
Cdk5rap1Q8BTW8 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cdk5rap1Q8BTW8 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Cdk5rap1Q8BTW8 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdk5rap1Q8BTW8 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cdk5rap1Q8BTW8 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cdk5rap1Q8BTW8 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdk5rap1Q8BTW8 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms