Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Gm44428-201ENSMUST00000204474 874 ntBASIC19.86■□□□□ 0.77
Prpf18Q8BM39 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prpf18Q8BM39 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Prpf18Q8BM39 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prpf18Q8BM39 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Prpf18Q8BM39 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prpf18Q8BM39 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prpf18Q8BM39 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prpf18Q8BM39 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
Prpf18Q8BM39 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Prpf18Q8BM39 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Prpf18Q8BM39 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Prpf18Q8BM39 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.84■□□□□ 0.77
Prpf18Q8BM39 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Prpf18Q8BM39 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Prpf18Q8BM39 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Prpf18Q8BM39 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Prpf18Q8BM39 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
Prpf18Q8BM39 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
Prpf18Q8BM39 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Prpf18Q8BM39 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.83■□□□□ 0.77
Prpf18Q8BM39 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Prpf18Q8BM39 Gm9806-201ENSMUST00000051080 552 ntBASIC19.83■□□□□ 0.77
Prpf18Q8BM39 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Prpf18Q8BM39 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Prpf18Q8BM39 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
Prpf18Q8BM39 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Prpf18Q8BM39 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.83■□□□□ 0.76
Prpf18Q8BM39 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Prpf18Q8BM39 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Prpf18Q8BM39 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.82■□□□□ 0.76
Prpf18Q8BM39 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Prpf18Q8BM39 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Prpf18Q8BM39 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Prpf18Q8BM39 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Prpf18Q8BM39 Gm16437-201ENSMUST00000025669 507 ntBASIC19.82■□□□□ 0.76
Prpf18Q8BM39 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Prpf18Q8BM39 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Prpf18Q8BM39 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Prpf18Q8BM39 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prpf18Q8BM39 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prpf18Q8BM39 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Prpf18Q8BM39 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prpf18Q8BM39 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Prpf18Q8BM39 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Prpf18Q8BM39 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prpf18Q8BM39 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
Prpf18Q8BM39 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Prpf18Q8BM39 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Prpf18Q8BM39 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Prpf18Q8BM39 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Prpf18Q8BM39 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Prpf18Q8BM39 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Prpf18Q8BM39 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Prpf18Q8BM39 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Prpf18Q8BM39 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Prpf18Q8BM39 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.8■□□□□ 0.76
Prpf18Q8BM39 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Prpf18Q8BM39 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Prpf18Q8BM39 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Prpf18Q8BM39 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Prpf18Q8BM39 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Prpf18Q8BM39 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prpf18Q8BM39 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prpf18Q8BM39 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prpf18Q8BM39 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prpf18Q8BM39 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prpf18Q8BM39 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prpf18Q8BM39 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prpf18Q8BM39 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prpf18Q8BM39 Gm11687-201ENSMUST00000118911 886 ntBASIC19.78■□□□□ 0.76
Prpf18Q8BM39 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prpf18Q8BM39 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prpf18Q8BM39 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prpf18Q8BM39 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.77■□□□□ 0.76
Prpf18Q8BM39 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.77■□□□□ 0.76
Prpf18Q8BM39 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Prpf18Q8BM39 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Prpf18Q8BM39 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.77■□□□□ 0.76
Prpf18Q8BM39 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Prpf18Q8BM39 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Prpf18Q8BM39 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf18Q8BM39 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.76■□□□□ 0.75
Prpf18Q8BM39 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf18Q8BM39 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
Prpf18Q8BM39 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Prpf18Q8BM39 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.76■□□□□ 0.75
Prpf18Q8BM39 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf18Q8BM39 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf18Q8BM39 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf18Q8BM39 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Prpf18Q8BM39 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf18Q8BM39 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.75■□□□□ 0.75
Prpf18Q8BM39 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf18Q8BM39 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Prpf18Q8BM39 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf18Q8BM39 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Prpf18Q8BM39 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.74■□□□□ 0.75
Prpf18Q8BM39 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf18Q8BM39 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms