Protein–RNA interactions for Protein: Q8BKN5

Tubgcp5, Gamma-tubulin complex component 5, mousemouse

Predictions only

Length 1,024 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp5Q8BKN5 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tubgcp5Q8BKN5 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tubgcp5Q8BKN5 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tubgcp5Q8BKN5 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Tubgcp5Q8BKN5 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tubgcp5Q8BKN5 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tubgcp5Q8BKN5 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tubgcp5Q8BKN5 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.85■□□□□ 0.93
Tubgcp5Q8BKN5 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Tubgcp5Q8BKN5 Iqck-206ENSMUST00000208658 2891 ntBASIC20.84■□□□□ 0.93
Tubgcp5Q8BKN5 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.84■□□□□ 0.93
Tubgcp5Q8BKN5 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tubgcp5Q8BKN5 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Tubgcp5Q8BKN5 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Tubgcp5Q8BKN5 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tubgcp5Q8BKN5 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.84■□□□□ 0.93
Tubgcp5Q8BKN5 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Tubgcp5Q8BKN5 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tubgcp5Q8BKN5 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tubgcp5Q8BKN5 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tubgcp5Q8BKN5 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tubgcp5Q8BKN5 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Tubgcp5Q8BKN5 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Tubgcp5Q8BKN5 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Tubgcp5Q8BKN5 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Tubgcp5Q8BKN5 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Tubgcp5Q8BKN5 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tubgcp5Q8BKN5 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.82■□□□□ 0.92
Tubgcp5Q8BKN5 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tubgcp5Q8BKN5 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tubgcp5Q8BKN5 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Tubgcp5Q8BKN5 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tubgcp5Q8BKN5 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tubgcp5Q8BKN5 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tubgcp5Q8BKN5 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tubgcp5Q8BKN5 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tubgcp5Q8BKN5 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tubgcp5Q8BKN5 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tubgcp5Q8BKN5 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tubgcp5Q8BKN5 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.81■□□□□ 0.92
Tubgcp5Q8BKN5 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Tubgcp5Q8BKN5 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.81■□□□□ 0.92
Tubgcp5Q8BKN5 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Tubgcp5Q8BKN5 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tubgcp5Q8BKN5 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tubgcp5Q8BKN5 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Tubgcp5Q8BKN5 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Tubgcp5Q8BKN5 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Tubgcp5Q8BKN5 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Tubgcp5Q8BKN5 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tubgcp5Q8BKN5 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tubgcp5Q8BKN5 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Tubgcp5Q8BKN5 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tubgcp5Q8BKN5 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tubgcp5Q8BKN5 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.78■□□□□ 0.92
Tubgcp5Q8BKN5 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tubgcp5Q8BKN5 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tubgcp5Q8BKN5 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tubgcp5Q8BKN5 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tubgcp5Q8BKN5 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Tubgcp5Q8BKN5 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.78■□□□□ 0.92
Tubgcp5Q8BKN5 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Tubgcp5Q8BKN5 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tubgcp5Q8BKN5 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tubgcp5Q8BKN5 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tubgcp5Q8BKN5 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Tubgcp5Q8BKN5 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
Tubgcp5Q8BKN5 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tubgcp5Q8BKN5 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tubgcp5Q8BKN5 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tubgcp5Q8BKN5 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tubgcp5Q8BKN5 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Tubgcp5Q8BKN5 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tubgcp5Q8BKN5 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tubgcp5Q8BKN5 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Tubgcp5Q8BKN5 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tubgcp5Q8BKN5 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.76■□□□□ 0.91
Tubgcp5Q8BKN5 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tubgcp5Q8BKN5 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Tubgcp5Q8BKN5 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Tubgcp5Q8BKN5 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tubgcp5Q8BKN5 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tubgcp5Q8BKN5 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tubgcp5Q8BKN5 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.75■□□□□ 0.91
Tubgcp5Q8BKN5 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.75■□□□□ 0.91
Tubgcp5Q8BKN5 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tubgcp5Q8BKN5 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Tubgcp5Q8BKN5 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tubgcp5Q8BKN5 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tubgcp5Q8BKN5 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tubgcp5Q8BKN5 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tubgcp5Q8BKN5 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tubgcp5Q8BKN5 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Tubgcp5Q8BKN5 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Tubgcp5Q8BKN5 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Tubgcp5Q8BKN5 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tubgcp5Q8BKN5 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Tubgcp5Q8BKN5 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tubgcp5Q8BKN5 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Tubgcp5Q8BKN5 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms