Protein–RNA interactions for Protein: Q8BKN5

Tubgcp5, Gamma-tubulin complex component 5, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp5Q8BKN5 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tubgcp5Q8BKN5 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tubgcp5Q8BKN5 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tubgcp5Q8BKN5 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Tubgcp5Q8BKN5 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tubgcp5Q8BKN5 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tubgcp5Q8BKN5 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tubgcp5Q8BKN5 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.85■□□□□ 0.93
Tubgcp5Q8BKN5 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Tubgcp5Q8BKN5 Iqck-206ENSMUST00000208658 2891 ntBASIC20.84■□□□□ 0.93
Tubgcp5Q8BKN5 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.84■□□□□ 0.93
Tubgcp5Q8BKN5 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tubgcp5Q8BKN5 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Tubgcp5Q8BKN5 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Tubgcp5Q8BKN5 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tubgcp5Q8BKN5 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.84■□□□□ 0.93
Tubgcp5Q8BKN5 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Tubgcp5Q8BKN5 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tubgcp5Q8BKN5 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tubgcp5Q8BKN5 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tubgcp5Q8BKN5 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tubgcp5Q8BKN5 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Tubgcp5Q8BKN5 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Tubgcp5Q8BKN5 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Tubgcp5Q8BKN5 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Tubgcp5Q8BKN5 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Tubgcp5Q8BKN5 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tubgcp5Q8BKN5 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.82■□□□□ 0.92
Tubgcp5Q8BKN5 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tubgcp5Q8BKN5 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tubgcp5Q8BKN5 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Tubgcp5Q8BKN5 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tubgcp5Q8BKN5 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tubgcp5Q8BKN5 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tubgcp5Q8BKN5 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tubgcp5Q8BKN5 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tubgcp5Q8BKN5 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tubgcp5Q8BKN5 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tubgcp5Q8BKN5 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tubgcp5Q8BKN5 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.81■□□□□ 0.92
Tubgcp5Q8BKN5 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Tubgcp5Q8BKN5 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.81■□□□□ 0.92
Tubgcp5Q8BKN5 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Tubgcp5Q8BKN5 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tubgcp5Q8BKN5 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tubgcp5Q8BKN5 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Tubgcp5Q8BKN5 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Tubgcp5Q8BKN5 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Tubgcp5Q8BKN5 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Tubgcp5Q8BKN5 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tubgcp5Q8BKN5 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tubgcp5Q8BKN5 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Tubgcp5Q8BKN5 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tubgcp5Q8BKN5 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tubgcp5Q8BKN5 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.78■□□□□ 0.92
Tubgcp5Q8BKN5 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tubgcp5Q8BKN5 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tubgcp5Q8BKN5 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tubgcp5Q8BKN5 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tubgcp5Q8BKN5 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Tubgcp5Q8BKN5 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.78■□□□□ 0.92
Tubgcp5Q8BKN5 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Tubgcp5Q8BKN5 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tubgcp5Q8BKN5 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tubgcp5Q8BKN5 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tubgcp5Q8BKN5 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Tubgcp5Q8BKN5 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
Tubgcp5Q8BKN5 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tubgcp5Q8BKN5 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tubgcp5Q8BKN5 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tubgcp5Q8BKN5 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tubgcp5Q8BKN5 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Tubgcp5Q8BKN5 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tubgcp5Q8BKN5 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tubgcp5Q8BKN5 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Tubgcp5Q8BKN5 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tubgcp5Q8BKN5 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.76■□□□□ 0.91
Tubgcp5Q8BKN5 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tubgcp5Q8BKN5 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Tubgcp5Q8BKN5 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Tubgcp5Q8BKN5 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tubgcp5Q8BKN5 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tubgcp5Q8BKN5 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tubgcp5Q8BKN5 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.75■□□□□ 0.91
Tubgcp5Q8BKN5 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.75■□□□□ 0.91
Tubgcp5Q8BKN5 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tubgcp5Q8BKN5 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Tubgcp5Q8BKN5 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tubgcp5Q8BKN5 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tubgcp5Q8BKN5 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tubgcp5Q8BKN5 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tubgcp5Q8BKN5 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tubgcp5Q8BKN5 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Tubgcp5Q8BKN5 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Tubgcp5Q8BKN5 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Tubgcp5Q8BKN5 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tubgcp5Q8BKN5 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Tubgcp5Q8BKN5 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tubgcp5Q8BKN5 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Tubgcp5Q8BKN5 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms