Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trim50Q810I2 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim50Q810I2 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim50Q810I2 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim50Q810I2 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim50Q810I2 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim50Q810I2 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim50Q810I2 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim50Q810I2 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim50Q810I2 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trim50Q810I2 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Trim50Q810I2 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trim50Q810I2 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim50Q810I2 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.49■□□□□ 0.87
Trim50Q810I2 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.49■□□□□ 0.87
Trim50Q810I2 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim50Q810I2 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Trim50Q810I2 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim50Q810I2 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim50Q810I2 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trim50Q810I2 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.49■□□□□ 0.87
Trim50Q810I2 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim50Q810I2 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trim50Q810I2 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.48■□□□□ 0.87
Trim50Q810I2 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim50Q810I2 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
Trim50Q810I2 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.48■□□□□ 0.87
Trim50Q810I2 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.48■□□□□ 0.87
Trim50Q810I2 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim50Q810I2 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim50Q810I2 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim50Q810I2 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim50Q810I2 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Trim50Q810I2 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Trim50Q810I2 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
Trim50Q810I2 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Trim50Q810I2 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim50Q810I2 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Trim50Q810I2 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.46■□□□□ 0.87
Trim50Q810I2 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.46■□□□□ 0.87
Trim50Q810I2 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.46■□□□□ 0.87
Trim50Q810I2 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Trim50Q810I2 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.46■□□□□ 0.87
Trim50Q810I2 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Trim50Q810I2 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.45■□□□□ 0.87
Trim50Q810I2 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim50Q810I2 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trim50Q810I2 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.45■□□□□ 0.86
Trim50Q810I2 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim50Q810I2 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim50Q810I2 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim50Q810I2 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Trim50Q810I2 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trim50Q810I2 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim50Q810I2 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim50Q810I2 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.44■□□□□ 0.86
Trim50Q810I2 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Trim50Q810I2 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trim50Q810I2 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim50Q810I2 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Trim50Q810I2 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.44■□□□□ 0.86
Trim50Q810I2 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Trim50Q810I2 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.44■□□□□ 0.86
Trim50Q810I2 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Trim50Q810I2 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Trim50Q810I2 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.43■□□□□ 0.86
Trim50Q810I2 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
Trim50Q810I2 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trim50Q810I2 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.43■□□□□ 0.86
Trim50Q810I2 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.43■□□□□ 0.86
Trim50Q810I2 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim50Q810I2 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim50Q810I2 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim50Q810I2 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim50Q810I2 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim50Q810I2 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Trim50Q810I2 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Trim50Q810I2 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim50Q810I2 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trim50Q810I2 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
Trim50Q810I2 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trim50Q810I2 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim50Q810I2 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.41■□□□□ 0.86
Trim50Q810I2 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim50Q810I2 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
Trim50Q810I2 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim50Q810I2 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim50Q810I2 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim50Q810I2 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim50Q810I2 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim50Q810I2 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim50Q810I2 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.4■□□□□ 0.86
Trim50Q810I2 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim50Q810I2 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim50Q810I2 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim50Q810I2 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.39■□□□□ 0.86
Trim50Q810I2 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim50Q810I2 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.39■□□□□ 0.85
Trim50Q810I2 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim50Q810I2 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms