Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Vrk1Q80X41 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vrk1Q80X41 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.09■□□□□ 0.81
Vrk1Q80X41 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vrk1Q80X41 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vrk1Q80X41 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vrk1Q80X41 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vrk1Q80X41 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vrk1Q80X41 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
Vrk1Q80X41 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Vrk1Q80X41 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Vrk1Q80X41 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Vrk1Q80X41 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Vrk1Q80X41 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Vrk1Q80X41 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Vrk1Q80X41 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Vrk1Q80X41 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.08■□□□□ 0.8
Vrk1Q80X41 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Vrk1Q80X41 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vrk1Q80X41 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Vrk1Q80X41 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vrk1Q80X41 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vrk1Q80X41 Gm27454-201ENSMUST00000185090 204 ntBASIC20.06■□□□□ 0.8
Vrk1Q80X41 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
Vrk1Q80X41 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Vrk1Q80X41 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vrk1Q80X41 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vrk1Q80X41 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vrk1Q80X41 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Vrk1Q80X41 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vrk1Q80X41 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vrk1Q80X41 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Vrk1Q80X41 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Vrk1Q80X41 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.05■□□□□ 0.8
Vrk1Q80X41 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vrk1Q80X41 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Vrk1Q80X41 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vrk1Q80X41 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vrk1Q80X41 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Vrk1Q80X41 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Vrk1Q80X41 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vrk1Q80X41 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Vrk1Q80X41 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Vrk1Q80X41 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vrk1Q80X41 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vrk1Q80X41 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vrk1Q80X41 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vrk1Q80X41 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.02■□□□□ 0.8
Vrk1Q80X41 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.02■□□□□ 0.8
Vrk1Q80X41 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.02■□□□□ 0.8
Vrk1Q80X41 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.02■□□□□ 0.8
Vrk1Q80X41 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vrk1Q80X41 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Vrk1Q80X41 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Vrk1Q80X41 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.02■□□□□ 0.79
Vrk1Q80X41 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vrk1Q80X41 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.01■□□□□ 0.79
Vrk1Q80X41 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vrk1Q80X41 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vrk1Q80X41 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.01■□□□□ 0.79
Vrk1Q80X41 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Vrk1Q80X41 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Vrk1Q80X41 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20■□□□□ 0.79
Vrk1Q80X41 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
Vrk1Q80X41 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20■□□□□ 0.79
Vrk1Q80X41 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20■□□□□ 0.79
Vrk1Q80X41 Gm45417-201ENSMUST00000209533 758 ntBASIC20■□□□□ 0.79
Vrk1Q80X41 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Vrk1Q80X41 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20■□□□□ 0.79
Vrk1Q80X41 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Vrk1Q80X41 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vrk1Q80X41 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Vrk1Q80X41 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.99■□□□□ 0.79
Vrk1Q80X41 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Vrk1Q80X41 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Vrk1Q80X41 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.99■□□□□ 0.79
Vrk1Q80X41 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vrk1Q80X41 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Vrk1Q80X41 Serp2-204ENSMUST00000228055 705 ntBASIC19.98■□□□□ 0.79
Vrk1Q80X41 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Vrk1Q80X41 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Vrk1Q80X41 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Vrk1Q80X41 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Vrk1Q80X41 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vrk1Q80X41 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vrk1Q80X41 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vrk1Q80X41 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vrk1Q80X41 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vrk1Q80X41 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vrk1Q80X41 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vrk1Q80X41 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vrk1Q80X41 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vrk1Q80X41 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Vrk1Q80X41 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.96■□□□□ 0.79
Vrk1Q80X41 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vrk1Q80X41 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.96■□□□□ 0.79
Vrk1Q80X41 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vrk1Q80X41 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.95■□□□□ 0.78
Vrk1Q80X41 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.95■□□□□ 0.78
Vrk1Q80X41 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms