Protein–RNA interactions for Protein: Q80VM9

Otop1, Otopetrin-1, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otop1Q80VM9 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Otop1Q80VM9 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Otop1Q80VM9 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.2■□□□□ 0.82
Otop1Q80VM9 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.2■□□□□ 0.82
Otop1Q80VM9 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Otop1Q80VM9 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Otop1Q80VM9 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.19■□□□□ 0.82
Otop1Q80VM9 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.19■□□□□ 0.82
Otop1Q80VM9 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Otop1Q80VM9 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Otop1Q80VM9 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Otop1Q80VM9 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Otop1Q80VM9 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.18■□□□□ 0.82
Otop1Q80VM9 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Otop1Q80VM9 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Otop1Q80VM9 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Otop1Q80VM9 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Otop1Q80VM9 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Otop1Q80VM9 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Otop1Q80VM9 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Otop1Q80VM9 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Otop1Q80VM9 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Otop1Q80VM9 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Otop1Q80VM9 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Otop1Q80VM9 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Otop1Q80VM9 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.16■□□□□ 0.82
Otop1Q80VM9 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.16■□□□□ 0.82
Otop1Q80VM9 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Otop1Q80VM9 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.16■□□□□ 0.82
Otop1Q80VM9 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Otop1Q80VM9 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Otop1Q80VM9 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Otop1Q80VM9 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.15■□□□□ 0.82
Otop1Q80VM9 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.15■□□□□ 0.82
Otop1Q80VM9 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Otop1Q80VM9 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Otop1Q80VM9 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Otop1Q80VM9 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Otop1Q80VM9 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Otop1Q80VM9 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Otop1Q80VM9 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
Otop1Q80VM9 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Otop1Q80VM9 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Otop1Q80VM9 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Otop1Q80VM9 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.14■□□□□ 0.81
Otop1Q80VM9 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.14■□□□□ 0.81
Otop1Q80VM9 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.14■□□□□ 0.81
Otop1Q80VM9 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
Otop1Q80VM9 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Otop1Q80VM9 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Otop1Q80VM9 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.13■□□□□ 0.81
Otop1Q80VM9 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Otop1Q80VM9 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.13■□□□□ 0.81
Otop1Q80VM9 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
Otop1Q80VM9 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
Otop1Q80VM9 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Otop1Q80VM9 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Otop1Q80VM9 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Otop1Q80VM9 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Otop1Q80VM9 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Otop1Q80VM9 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.11■□□□□ 0.81
Otop1Q80VM9 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Otop1Q80VM9 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Otop1Q80VM9 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Otop1Q80VM9 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Otop1Q80VM9 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Otop1Q80VM9 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Otop1Q80VM9 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Otop1Q80VM9 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.1■□□□□ 0.81
Otop1Q80VM9 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Otop1Q80VM9 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Otop1Q80VM9 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Otop1Q80VM9 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Otop1Q80VM9 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.1■□□□□ 0.81
Otop1Q80VM9 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Otop1Q80VM9 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Otop1Q80VM9 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Otop1Q80VM9 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Otop1Q80VM9 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Otop1Q80VM9 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.09■□□□□ 0.81
Otop1Q80VM9 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.09■□□□□ 0.81
Otop1Q80VM9 Gm6139-201ENSMUST00000079261 882 ntBASIC20.09■□□□□ 0.81
Otop1Q80VM9 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Otop1Q80VM9 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Otop1Q80VM9 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Otop1Q80VM9 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Otop1Q80VM9 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Otop1Q80VM9 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.08■□□□□ 0.81
Otop1Q80VM9 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Otop1Q80VM9 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Otop1Q80VM9 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Otop1Q80VM9 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Otop1Q80VM9 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.8
Otop1Q80VM9 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Otop1Q80VM9 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.07■□□□□ 0.8
Otop1Q80VM9 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Otop1Q80VM9 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Otop1Q80VM9 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
Otop1Q80VM9 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.07■□□□□ 0.8
Otop1Q80VM9 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms