Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdh19Q80TF3 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdh19Q80TF3 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdh19Q80TF3 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdh19Q80TF3 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdh19Q80TF3 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdh19Q80TF3 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Pcdh19Q80TF3 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.66■□□□□ 0.9
Pcdh19Q80TF3 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdh19Q80TF3 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Pcdh19Q80TF3 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdh19Q80TF3 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.65■□□□□ 0.9
Pcdh19Q80TF3 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdh19Q80TF3 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdh19Q80TF3 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdh19Q80TF3 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Pcdh19Q80TF3 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pcdh19Q80TF3 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.64■□□□□ 0.89
Pcdh19Q80TF3 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdh19Q80TF3 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdh19Q80TF3 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
Pcdh19Q80TF3 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdh19Q80TF3 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdh19Q80TF3 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdh19Q80TF3 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdh19Q80TF3 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdh19Q80TF3 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdh19Q80TF3 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdh19Q80TF3 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Pcdh19Q80TF3 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdh19Q80TF3 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdh19Q80TF3 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Pcdh19Q80TF3 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Pcdh19Q80TF3 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdh19Q80TF3 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.62■□□□□ 0.89
Pcdh19Q80TF3 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdh19Q80TF3 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdh19Q80TF3 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Pcdh19Q80TF3 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdh19Q80TF3 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdh19Q80TF3 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdh19Q80TF3 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdh19Q80TF3 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdh19Q80TF3 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Pcdh19Q80TF3 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdh19Q80TF3 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdh19Q80TF3 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdh19Q80TF3 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdh19Q80TF3 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdh19Q80TF3 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.6■□□□□ 0.89
Pcdh19Q80TF3 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Pcdh19Q80TF3 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.6■□□□□ 0.89
Pcdh19Q80TF3 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdh19Q80TF3 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdh19Q80TF3 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdh19Q80TF3 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdh19Q80TF3 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdh19Q80TF3 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.59■□□□□ 0.89
Pcdh19Q80TF3 Gm13241-201ENSMUST00000094493 780 ntBASIC20.59■□□□□ 0.89
Pcdh19Q80TF3 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdh19Q80TF3 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdh19Q80TF3 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Pcdh19Q80TF3 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Pcdh19Q80TF3 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Pcdh19Q80TF3 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.58■□□□□ 0.89
Pcdh19Q80TF3 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdh19Q80TF3 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdh19Q80TF3 Gm9847-201ENSMUST00000052528 599 ntBASIC20.58■□□□□ 0.89
Pcdh19Q80TF3 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdh19Q80TF3 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh19Q80TF3 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.57■□□□□ 0.88
Pcdh19Q80TF3 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh19Q80TF3 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh19Q80TF3 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.57■□□□□ 0.88
Pcdh19Q80TF3 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh19Q80TF3 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh19Q80TF3 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh19Q80TF3 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh19Q80TF3 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Pcdh19Q80TF3 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh19Q80TF3 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh19Q80TF3 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh19Q80TF3 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdh19Q80TF3 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdh19Q80TF3 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdh19Q80TF3 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdh19Q80TF3 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdh19Q80TF3 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Pcdh19Q80TF3 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.56■□□□□ 0.88
Pcdh19Q80TF3 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdh19Q80TF3 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdh19Q80TF3 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdh19Q80TF3 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdh19Q80TF3 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdh19Q80TF3 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.55■□□□□ 0.88
Pcdh19Q80TF3 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdh19Q80TF3 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdh19Q80TF3 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh19Q80TF3 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.54■□□□□ 0.88
Pcdh19Q80TF3 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms