Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rfx4Q7TNK1 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Rfx4Q7TNK1 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rfx4Q7TNK1 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Rfx4Q7TNK1 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rfx4Q7TNK1 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rfx4Q7TNK1 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
Rfx4Q7TNK1 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.13■□□□□ 0.81
Rfx4Q7TNK1 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rfx4Q7TNK1 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rfx4Q7TNK1 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rfx4Q7TNK1 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
Rfx4Q7TNK1 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.12■□□□□ 0.81
Rfx4Q7TNK1 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rfx4Q7TNK1 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rfx4Q7TNK1 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Rfx4Q7TNK1 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rfx4Q7TNK1 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rfx4Q7TNK1 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rfx4Q7TNK1 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Rfx4Q7TNK1 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rfx4Q7TNK1 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.11■□□□□ 0.81
Rfx4Q7TNK1 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rfx4Q7TNK1 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rfx4Q7TNK1 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfx4Q7TNK1 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfx4Q7TNK1 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Rfx4Q7TNK1 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfx4Q7TNK1 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rfx4Q7TNK1 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rfx4Q7TNK1 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rfx4Q7TNK1 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Rfx4Q7TNK1 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rfx4Q7TNK1 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Rfx4Q7TNK1 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rfx4Q7TNK1 Gm44428-201ENSMUST00000204474 874 ntBASIC20.09■□□□□ 0.81
Rfx4Q7TNK1 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rfx4Q7TNK1 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.09■□□□□ 0.81
Rfx4Q7TNK1 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.09■□□□□ 0.81
Rfx4Q7TNK1 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rfx4Q7TNK1 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rfx4Q7TNK1 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rfx4Q7TNK1 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Rfx4Q7TNK1 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rfx4Q7TNK1 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
Rfx4Q7TNK1 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Rfx4Q7TNK1 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rfx4Q7TNK1 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rfx4Q7TNK1 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.08■□□□□ 0.8
Rfx4Q7TNK1 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rfx4Q7TNK1 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rfx4Q7TNK1 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rfx4Q7TNK1 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rfx4Q7TNK1 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rfx4Q7TNK1 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rfx4Q7TNK1 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Rfx4Q7TNK1 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Rfx4Q7TNK1 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rfx4Q7TNK1 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rfx4Q7TNK1 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.06■□□□□ 0.8
Rfx4Q7TNK1 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.06■□□□□ 0.8
Rfx4Q7TNK1 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rfx4Q7TNK1 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Rfx4Q7TNK1 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rfx4Q7TNK1 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rfx4Q7TNK1 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rfx4Q7TNK1 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.06■□□□□ 0.8
Rfx4Q7TNK1 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rfx4Q7TNK1 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.05■□□□□ 0.8
Rfx4Q7TNK1 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rfx4Q7TNK1 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rfx4Q7TNK1 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.05■□□□□ 0.8
Rfx4Q7TNK1 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rfx4Q7TNK1 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rfx4Q7TNK1 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rfx4Q7TNK1 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rfx4Q7TNK1 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.05■□□□□ 0.8
Rfx4Q7TNK1 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rfx4Q7TNK1 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rfx4Q7TNK1 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rfx4Q7TNK1 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rfx4Q7TNK1 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rfx4Q7TNK1 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.04■□□□□ 0.8
Rfx4Q7TNK1 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.04■□□□□ 0.8
Rfx4Q7TNK1 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rfx4Q7TNK1 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rfx4Q7TNK1 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rfx4Q7TNK1 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rfx4Q7TNK1 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Rfx4Q7TNK1 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rfx4Q7TNK1 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rfx4Q7TNK1 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.03■□□□□ 0.8
Rfx4Q7TNK1 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.03■□□□□ 0.8
Rfx4Q7TNK1 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rfx4Q7TNK1 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rfx4Q7TNK1 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Rfx4Q7TNK1 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rfx4Q7TNK1 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rfx4Q7TNK1 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.02■□□□□ 0.8
Rfx4Q7TNK1 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms