Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcd3Q6P9Z1 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcd3Q6P9Z1 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcd3Q6P9Z1 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcd3Q6P9Z1 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Smarcd3Q6P9Z1 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcd3Q6P9Z1 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcd3Q6P9Z1 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcd3Q6P9Z1 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcd3Q6P9Z1 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.2■□□□□ 0.66
Smarcd3Q6P9Z1 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Smarcd3Q6P9Z1 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Smarcd3Q6P9Z1 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcd3Q6P9Z1 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcd3Q6P9Z1 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcd3Q6P9Z1 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcd3Q6P9Z1 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcd3Q6P9Z1 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcd3Q6P9Z1 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcd3Q6P9Z1 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcd3Q6P9Z1 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcd3Q6P9Z1 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcd3Q6P9Z1 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcd3Q6P9Z1 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcd3Q6P9Z1 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcd3Q6P9Z1 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Smarcd3Q6P9Z1 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcd3Q6P9Z1 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.19■□□□□ 0.66
Smarcd3Q6P9Z1 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smarcd3Q6P9Z1 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smarcd3Q6P9Z1 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smarcd3Q6P9Z1 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Smarcd3Q6P9Z1 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smarcd3Q6P9Z1 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smarcd3Q6P9Z1 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.17■□□□□ 0.66
Smarcd3Q6P9Z1 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcd3Q6P9Z1 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcd3Q6P9Z1 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Smarcd3Q6P9Z1 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcd3Q6P9Z1 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcd3Q6P9Z1 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smarcd3Q6P9Z1 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smarcd3Q6P9Z1 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.16■□□□□ 0.66
Smarcd3Q6P9Z1 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smarcd3Q6P9Z1 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Smarcd3Q6P9Z1 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smarcd3Q6P9Z1 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
Smarcd3Q6P9Z1 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcd3Q6P9Z1 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcd3Q6P9Z1 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcd3Q6P9Z1 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcd3Q6P9Z1 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcd3Q6P9Z1 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.15■□□□□ 0.66
Smarcd3Q6P9Z1 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Smarcd3Q6P9Z1 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcd3Q6P9Z1 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Smarcd3Q6P9Z1 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcd3Q6P9Z1 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Smarcd3Q6P9Z1 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Smarcd3Q6P9Z1 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smarcd3Q6P9Z1 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smarcd3Q6P9Z1 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smarcd3Q6P9Z1 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smarcd3Q6P9Z1 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Smarcd3Q6P9Z1 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcd3Q6P9Z1 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcd3Q6P9Z1 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcd3Q6P9Z1 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.13■□□□□ 0.65
Smarcd3Q6P9Z1 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcd3Q6P9Z1 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcd3Q6P9Z1 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcd3Q6P9Z1 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Smarcd3Q6P9Z1 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smarcd3Q6P9Z1 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smarcd3Q6P9Z1 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Smarcd3Q6P9Z1 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.11■□□□□ 0.65
Smarcd3Q6P9Z1 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcd3Q6P9Z1 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Smarcd3Q6P9Z1 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.11■□□□□ 0.65
Smarcd3Q6P9Z1 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcd3Q6P9Z1 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcd3Q6P9Z1 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.11■□□□□ 0.65
Smarcd3Q6P9Z1 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.11■□□□□ 0.65
Smarcd3Q6P9Z1 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcd3Q6P9Z1 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcd3Q6P9Z1 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcd3Q6P9Z1 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Smarcd3Q6P9Z1 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smarcd3Q6P9Z1 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.1■□□□□ 0.65
Smarcd3Q6P9Z1 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smarcd3Q6P9Z1 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smarcd3Q6P9Z1 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smarcd3Q6P9Z1 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smarcd3Q6P9Z1 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Smarcd3Q6P9Z1 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smarcd3Q6P9Z1 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smarcd3Q6P9Z1 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Smarcd3Q6P9Z1 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smarcd3Q6P9Z1 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smarcd3Q6P9Z1 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms