Protein–RNA interactions for Protein: Q63829

Commd3, COMM domain-containing protein 3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Commd3Q63829 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Commd3Q63829 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Commd3Q63829 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.43■□□□□ 0.38
Commd3Q63829 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Commd3Q63829 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Commd3Q63829 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Commd3Q63829 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Commd3Q63829 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Commd3Q63829 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Commd3Q63829 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Commd3Q63829 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Commd3Q63829 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Commd3Q63829 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Commd3Q63829 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Commd3Q63829 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Commd3Q63829 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Commd3Q63829 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Commd3Q63829 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Commd3Q63829 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Commd3Q63829 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Commd3Q63829 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Commd3Q63829 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.42■□□□□ 0.38
Commd3Q63829 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Commd3Q63829 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Commd3Q63829 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Commd3Q63829 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.42■□□□□ 0.38
Commd3Q63829 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Commd3Q63829 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Commd3Q63829 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Commd3Q63829 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.41■□□□□ 0.38
Commd3Q63829 Gm13889-201ENSMUST00000099689 1386 ntBASIC17.41■□□□□ 0.38
Commd3Q63829 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.41■□□□□ 0.38
Commd3Q63829 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Commd3Q63829 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Commd3Q63829 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.4■□□□□ 0.38
Commd3Q63829 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Commd3Q63829 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Commd3Q63829 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Commd3Q63829 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Commd3Q63829 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Commd3Q63829 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Commd3Q63829 Gm4799-201ENSMUST00000095396 657 ntBASIC17.4■□□□□ 0.38
Commd3Q63829 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Commd3Q63829 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Commd3Q63829 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Commd3Q63829 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
Commd3Q63829 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Commd3Q63829 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Commd3Q63829 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Commd3Q63829 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.39■□□□□ 0.37
Commd3Q63829 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Commd3Q63829 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Commd3Q63829 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
Commd3Q63829 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Commd3Q63829 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Commd3Q63829 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Commd3Q63829 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Commd3Q63829 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Commd3Q63829 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.38■□□□□ 0.37
Commd3Q63829 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Commd3Q63829 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Commd3Q63829 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Commd3Q63829 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Commd3Q63829 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Commd3Q63829 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Commd3Q63829 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Commd3Q63829 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Commd3Q63829 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Commd3Q63829 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.37■□□□□ 0.37
Commd3Q63829 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Commd3Q63829 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Commd3Q63829 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC17.36■□□□□ 0.37
Commd3Q63829 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Commd3Q63829 AC153911.1-201ENSMUST00000220378 758 ntBASIC17.36■□□□□ 0.37
Commd3Q63829 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Commd3Q63829 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Commd3Q63829 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Commd3Q63829 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.36■□□□□ 0.37
Commd3Q63829 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Commd3Q63829 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Commd3Q63829 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Commd3Q63829 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC17.35■□□□□ 0.37
Commd3Q63829 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Commd3Q63829 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Commd3Q63829 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.35■□□□□ 0.37
Commd3Q63829 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Commd3Q63829 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Commd3Q63829 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Commd3Q63829 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Commd3Q63829 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Commd3Q63829 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Commd3Q63829 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Commd3Q63829 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Commd3Q63829 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Commd3Q63829 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Commd3Q63829 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Commd3Q63829 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Commd3Q63829 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Commd3Q63829 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Commd3Q63829 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms