Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Six3Q62233 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.55■□□□□ 0.88
Six3Q62233 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Six3Q62233 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Six3Q62233 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Six3Q62233 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Six3Q62233 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Six3Q62233 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Six3Q62233 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Six3Q62233 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Six3Q62233 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Six3Q62233 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Six3Q62233 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Six3Q62233 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Six3Q62233 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.54■□□□□ 0.88
Six3Q62233 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Six3Q62233 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Six3Q62233 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.54■□□□□ 0.88
Six3Q62233 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Six3Q62233 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Six3Q62233 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Six3Q62233 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Six3Q62233 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Six3Q62233 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.53■□□□□ 0.88
Six3Q62233 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Six3Q62233 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Six3Q62233 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Six3Q62233 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Six3Q62233 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Six3Q62233 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Six3Q62233 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
Six3Q62233 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Six3Q62233 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Six3Q62233 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.52■□□□□ 0.88
Six3Q62233 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Six3Q62233 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Six3Q62233 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Six3Q62233 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
Six3Q62233 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Six3Q62233 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Six3Q62233 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Six3Q62233 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.51■□□□□ 0.87
Six3Q62233 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Six3Q62233 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Six3Q62233 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Six3Q62233 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Six3Q62233 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Six3Q62233 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Six3Q62233 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Six3Q62233 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Six3Q62233 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Six3Q62233 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.49■□□□□ 0.87
Six3Q62233 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Six3Q62233 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Six3Q62233 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Six3Q62233 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.49■□□□□ 0.87
Six3Q62233 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Six3Q62233 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Six3Q62233 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Six3Q62233 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
Six3Q62233 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.49■□□□□ 0.87
Six3Q62233 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Six3Q62233 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Six3Q62233 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Six3Q62233 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
Six3Q62233 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Six3Q62233 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Six3Q62233 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Six3Q62233 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Six3Q62233 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
Six3Q62233 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Six3Q62233 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Six3Q62233 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.47■□□□□ 0.87
Six3Q62233 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
Six3Q62233 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Six3Q62233 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Six3Q62233 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Six3Q62233 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Six3Q62233 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Six3Q62233 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Six3Q62233 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.45■□□□□ 0.87
Six3Q62233 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Six3Q62233 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Six3Q62233 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Six3Q62233 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Six3Q62233 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Six3Q62233 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Six3Q62233 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Six3Q62233 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Six3Q62233 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Six3Q62233 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Six3Q62233 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Six3Q62233 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Six3Q62233 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Six3Q62233 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Six3Q62233 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.43■□□□□ 0.86
Six3Q62233 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.43■□□□□ 0.86
Six3Q62233 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Six3Q62233 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Six3Q62233 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms