Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Notch3Q61982 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Notch3Q61982 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Notch3Q61982 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC16.01■□□□□ 0.15
Notch3Q61982 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Notch3Q61982 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Notch3Q61982 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Notch3Q61982 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Notch3Q61982 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Notch3Q61982 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Notch3Q61982 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Notch3Q61982 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Notch3Q61982 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Notch3Q61982 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC16.01■□□□□ 0.15
Notch3Q61982 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Notch3Q61982 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Notch3Q61982 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Notch3Q61982 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Notch3Q61982 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Notch3Q61982 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Notch3Q61982 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Notch3Q61982 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Notch3Q61982 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Notch3Q61982 Gm45417-201ENSMUST00000209533 758 ntBASIC16■□□□□ 0.15
Notch3Q61982 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Notch3Q61982 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Notch3Q61982 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC15.99■□□□□ 0.15
Notch3Q61982 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Notch3Q61982 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Notch3Q61982 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Notch3Q61982 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Notch3Q61982 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
Notch3Q61982 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Notch3Q61982 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Notch3Q61982 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Notch3Q61982 Il17rd-202ENSMUST00000223942 2186 ntBASIC15.99■□□□□ 0.15
Notch3Q61982 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Notch3Q61982 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Notch3Q61982 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
Notch3Q61982 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Notch3Q61982 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Notch3Q61982 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Notch3Q61982 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Notch3Q61982 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Notch3Q61982 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Notch3Q61982 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC15.98■□□□□ 0.15
Notch3Q61982 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Notch3Q61982 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Notch3Q61982 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Notch3Q61982 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Notch3Q61982 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Notch3Q61982 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Notch3Q61982 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Notch3Q61982 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Notch3Q61982 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Notch3Q61982 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Notch3Q61982 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Notch3Q61982 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC15.96■□□□□ 0.15
Notch3Q61982 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Notch3Q61982 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Notch3Q61982 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Notch3Q61982 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Notch3Q61982 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Notch3Q61982 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Notch3Q61982 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC15.95■□□□□ 0.14
Notch3Q61982 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Notch3Q61982 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Notch3Q61982 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Notch3Q61982 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Notch3Q61982 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Notch3Q61982 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Notch3Q61982 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC15.94■□□□□ 0.14
Notch3Q61982 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Notch3Q61982 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Notch3Q61982 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Notch3Q61982 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Notch3Q61982 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Notch3Q61982 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
Notch3Q61982 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC15.93■□□□□ 0.14
Notch3Q61982 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC15.93■□□□□ 0.14
Notch3Q61982 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Notch3Q61982 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC15.93■□□□□ 0.14
Notch3Q61982 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC15.93■□□□□ 0.14
Notch3Q61982 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Notch3Q61982 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Notch3Q61982 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Notch3Q61982 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Notch3Q61982 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
Notch3Q61982 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC15.92■□□□□ 0.14
Notch3Q61982 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Notch3Q61982 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC15.92■□□□□ 0.14
Notch3Q61982 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Notch3Q61982 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Notch3Q61982 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Notch3Q61982 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC15.92■□□□□ 0.14
Notch3Q61982 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Notch3Q61982 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC15.92■□□□□ 0.14
Notch3Q61982 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Notch3Q61982 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Notch3Q61982 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms