Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trav8d-1Q5R1H8 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav8d-1Q5R1H8 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
Trav8d-1Q5R1H8 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Trav8d-1Q5R1H8 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Trav8d-1Q5R1H8 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav8d-1Q5R1H8 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Trav8d-1Q5R1H8 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav8d-1Q5R1H8 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trav8d-1Q5R1H8 Gm22567-201ENSMUST00000175542 342 ntBASIC17.08■□□□□ 0.32
Trav8d-1Q5R1H8 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trav8d-1Q5R1H8 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trav8d-1Q5R1H8 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Trav8d-1Q5R1H8 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav8d-1Q5R1H8 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav8d-1Q5R1H8 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.07■□□□□ 0.32
Trav8d-1Q5R1H8 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav8d-1Q5R1H8 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC17.06■□□□□ 0.32
Trav8d-1Q5R1H8 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav8d-1Q5R1H8 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav8d-1Q5R1H8 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav8d-1Q5R1H8 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav8d-1Q5R1H8 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav8d-1Q5R1H8 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav8d-1Q5R1H8 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.05■□□□□ 0.32
Trav8d-1Q5R1H8 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav8d-1Q5R1H8 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav8d-1Q5R1H8 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav8d-1Q5R1H8 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav8d-1Q5R1H8 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Trav8d-1Q5R1H8 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav8d-1Q5R1H8 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav8d-1Q5R1H8 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav8d-1Q5R1H8 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav8d-1Q5R1H8 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav8d-1Q5R1H8 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav8d-1Q5R1H8 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav8d-1Q5R1H8 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav8d-1Q5R1H8 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC17.04■□□□□ 0.32
Trav8d-1Q5R1H8 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trav8d-1Q5R1H8 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav8d-1Q5R1H8 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Trav8d-1Q5R1H8 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav8d-1Q5R1H8 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav8d-1Q5R1H8 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.04■□□□□ 0.32
Trav8d-1Q5R1H8 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav8d-1Q5R1H8 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.03■□□□□ 0.32
Trav8d-1Q5R1H8 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav8d-1Q5R1H8 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav8d-1Q5R1H8 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav8d-1Q5R1H8 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav8d-1Q5R1H8 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trav8d-1Q5R1H8 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC17.03■□□□□ 0.32
Trav8d-1Q5R1H8 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav8d-1Q5R1H8 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav8d-1Q5R1H8 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav8d-1Q5R1H8 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trav8d-1Q5R1H8 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Trav8d-1Q5R1H8 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav8d-1Q5R1H8 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Trav8d-1Q5R1H8 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav8d-1Q5R1H8 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav8d-1Q5R1H8 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav8d-1Q5R1H8 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav8d-1Q5R1H8 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC17.02■□□□□ 0.32
Trav8d-1Q5R1H8 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Trav8d-1Q5R1H8 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav8d-1Q5R1H8 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav8d-1Q5R1H8 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav8d-1Q5R1H8 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav8d-1Q5R1H8 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav8d-1Q5R1H8 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav8d-1Q5R1H8 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav8d-1Q5R1H8 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav8d-1Q5R1H8 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav8d-1Q5R1H8 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC17.01■□□□□ 0.31
Trav8d-1Q5R1H8 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav8d-1Q5R1H8 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Trav8d-1Q5R1H8 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav8d-1Q5R1H8 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav8d-1Q5R1H8 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav8d-1Q5R1H8 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Trav8d-1Q5R1H8 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav8d-1Q5R1H8 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav8d-1Q5R1H8 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC17■□□□□ 0.31
Trav8d-1Q5R1H8 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav8d-1Q5R1H8 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trav8d-1Q5R1H8 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav8d-1Q5R1H8 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Trav8d-1Q5R1H8 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC17■□□□□ 0.31
Trav8d-1Q5R1H8 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav8d-1Q5R1H8 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Trav8d-1Q5R1H8 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav8d-1Q5R1H8 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav8d-1Q5R1H8 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav8d-1Q5R1H8 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC16.99■□□□□ 0.31
Trav8d-1Q5R1H8 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav8d-1Q5R1H8 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC16.99■□□□□ 0.31
Trav8d-1Q5R1H8 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav8d-1Q5R1H8 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms