Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Trav15-1-dv6-1Q5R1D2 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav15-1-dv6-1Q5R1D2 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav15-1-dv6-1Q5R1D2 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav15-1-dv6-1Q5R1D2 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Trav15-1-dv6-1Q5R1D2 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav15-1-dv6-1Q5R1D2 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav15-1-dv6-1Q5R1D2 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav15-1-dv6-1Q5R1D2 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Trav15-1-dv6-1Q5R1D2 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.3■□□□□ 0.2
Trav15-1-dv6-1Q5R1D2 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav15-1-dv6-1Q5R1D2 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav15-1-dv6-1Q5R1D2 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav15-1-dv6-1Q5R1D2 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav15-1-dv6-1Q5R1D2 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav15-1-dv6-1Q5R1D2 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav15-1-dv6-1Q5R1D2 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav15-1-dv6-1Q5R1D2 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav15-1-dv6-1Q5R1D2 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav15-1-dv6-1Q5R1D2 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav15-1-dv6-1Q5R1D2 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav15-1-dv6-1Q5R1D2 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC16.28■□□□□ 0.2
Trav15-1-dv6-1Q5R1D2 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav15-1-dv6-1Q5R1D2 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trav15-1-dv6-1Q5R1D2 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav15-1-dv6-1Q5R1D2 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav15-1-dv6-1Q5R1D2 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC16.28■□□□□ 0.2
Trav15-1-dv6-1Q5R1D2 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC16.28■□□□□ 0.2
Trav15-1-dv6-1Q5R1D2 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav15-1-dv6-1Q5R1D2 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Trav15-1-dv6-1Q5R1D2 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav15-1-dv6-1Q5R1D2 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC16.27■□□□□ 0.2
Trav15-1-dv6-1Q5R1D2 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Trav15-1-dv6-1Q5R1D2 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC16.27■□□□□ 0.2
Trav15-1-dv6-1Q5R1D2 Gm44428-201ENSMUST00000204474 874 ntBASIC16.27■□□□□ 0.2
Trav15-1-dv6-1Q5R1D2 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trav15-1-dv6-1Q5R1D2 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav15-1-dv6-1Q5R1D2 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC16.26■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC16.26■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 Pkd1-207ENSMUST00000228550 1050 ntBASIC16.26■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 AC164883.3-201ENSMUST00000227396 1774 ntBASIC16.26■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.25■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 AC117769.4-201ENSMUST00000225679 685 ntBASIC16.25■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC16.24■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC16.23■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 Gm7432-201ENSMUST00000210343 879 ntBASIC16.22■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC16.22■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav15-1-dv6-1Q5R1D2 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms