Protein–RNA interactions for Protein: Q5NC63

Gm12258, Predicted gene 12258, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12258Q5NC63 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm12258Q5NC63 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Gm12258Q5NC63 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Gm12258Q5NC63 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.29■□□□□ 0.52
Gm12258Q5NC63 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Gm12258Q5NC63 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Gm12258Q5NC63 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm12258Q5NC63 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Gm12258Q5NC63 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm12258Q5NC63 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Gm12258Q5NC63 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.28■□□□□ 0.52
Gm12258Q5NC63 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm12258Q5NC63 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm12258Q5NC63 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm12258Q5NC63 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.27■□□□□ 0.52
Gm12258Q5NC63 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm12258Q5NC63 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Gm12258Q5NC63 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Gm12258Q5NC63 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Gm12258Q5NC63 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.26■□□□□ 0.51
Gm12258Q5NC63 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Gm12258Q5NC63 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm12258Q5NC63 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Gm12258Q5NC63 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Gm12258Q5NC63 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm12258Q5NC63 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm12258Q5NC63 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm12258Q5NC63 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm12258Q5NC63 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Gm12258Q5NC63 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm12258Q5NC63 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm12258Q5NC63 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm12258Q5NC63 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.25■□□□□ 0.51
Gm12258Q5NC63 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Gm12258Q5NC63 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Gm12258Q5NC63 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm12258Q5NC63 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.25■□□□□ 0.51
Gm12258Q5NC63 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.25■□□□□ 0.51
Gm12258Q5NC63 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.25■□□□□ 0.51
Gm12258Q5NC63 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.25■□□□□ 0.51
Gm12258Q5NC63 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm12258Q5NC63 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
Gm12258Q5NC63 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.25■□□□□ 0.51
Gm12258Q5NC63 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm12258Q5NC63 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm12258Q5NC63 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Gm12258Q5NC63 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Gm12258Q5NC63 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.24■□□□□ 0.51
Gm12258Q5NC63 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.24■□□□□ 0.51
Gm12258Q5NC63 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm12258Q5NC63 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm12258Q5NC63 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Gm12258Q5NC63 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.23■□□□□ 0.51
Gm12258Q5NC63 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Gm12258Q5NC63 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.23■□□□□ 0.51
Gm12258Q5NC63 Gm10420-201ENSMUST00000121713 882 ntBASIC18.23■□□□□ 0.51
Gm12258Q5NC63 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Gm12258Q5NC63 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.23■□□□□ 0.51
Gm12258Q5NC63 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Gm12258Q5NC63 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm12258Q5NC63 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm12258Q5NC63 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Gm12258Q5NC63 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm12258Q5NC63 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Gm12258Q5NC63 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm12258Q5NC63 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm12258Q5NC63 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm12258Q5NC63 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm12258Q5NC63 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm12258Q5NC63 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm12258Q5NC63 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm12258Q5NC63 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm12258Q5NC63 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm12258Q5NC63 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm12258Q5NC63 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm12258Q5NC63 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.2■□□□□ 0.5
Gm12258Q5NC63 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gm12258Q5NC63 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm12258Q5NC63 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gm12258Q5NC63 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm12258Q5NC63 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm12258Q5NC63 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm12258Q5NC63 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.19■□□□□ 0.5
Gm12258Q5NC63 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm12258Q5NC63 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Gm12258Q5NC63 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm12258Q5NC63 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Gm12258Q5NC63 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm12258Q5NC63 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm12258Q5NC63 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Gm12258Q5NC63 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Gm12258Q5NC63 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.18■□□□□ 0.5
Gm12258Q5NC63 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Gm12258Q5NC63 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Gm12258Q5NC63 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.18■□□□□ 0.5
Gm12258Q5NC63 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Gm12258Q5NC63 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm12258Q5NC63 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm12258Q5NC63 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm12258Q5NC63 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 233 ms