Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Naf1Q3UMQ8 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Naf1Q3UMQ8 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Naf1Q3UMQ8 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.41■■□□□ 1.02
Naf1Q3UMQ8 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Naf1Q3UMQ8 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
Naf1Q3UMQ8 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Naf1Q3UMQ8 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Naf1Q3UMQ8 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Naf1Q3UMQ8 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Naf1Q3UMQ8 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Naf1Q3UMQ8 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
Naf1Q3UMQ8 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.4■■□□□ 1.02
Naf1Q3UMQ8 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Naf1Q3UMQ8 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
Naf1Q3UMQ8 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Naf1Q3UMQ8 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Naf1Q3UMQ8 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Naf1Q3UMQ8 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Naf1Q3UMQ8 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Naf1Q3UMQ8 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Naf1Q3UMQ8 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Naf1Q3UMQ8 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Naf1Q3UMQ8 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Naf1Q3UMQ8 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Naf1Q3UMQ8 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Naf1Q3UMQ8 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
Naf1Q3UMQ8 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Naf1Q3UMQ8 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Naf1Q3UMQ8 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Naf1Q3UMQ8 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.36■■□□□ 1.01
Naf1Q3UMQ8 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Naf1Q3UMQ8 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.36■■□□□ 1.01
Naf1Q3UMQ8 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.36■■□□□ 1.01
Naf1Q3UMQ8 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Naf1Q3UMQ8 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Naf1Q3UMQ8 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
Naf1Q3UMQ8 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Naf1Q3UMQ8 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Naf1Q3UMQ8 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Naf1Q3UMQ8 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Naf1Q3UMQ8 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Naf1Q3UMQ8 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Naf1Q3UMQ8 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Naf1Q3UMQ8 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Naf1Q3UMQ8 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.35■■□□□ 1.01
Naf1Q3UMQ8 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.35■■□□□ 1.01
Naf1Q3UMQ8 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Naf1Q3UMQ8 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.35■■□□□ 1.01
Naf1Q3UMQ8 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.35■■□□□ 1.01
Naf1Q3UMQ8 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Naf1Q3UMQ8 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Naf1Q3UMQ8 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Naf1Q3UMQ8 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Naf1Q3UMQ8 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Naf1Q3UMQ8 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Naf1Q3UMQ8 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Naf1Q3UMQ8 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.34■■□□□ 1.01
Naf1Q3UMQ8 Gm21956-201ENSMUST00000179946 522 ntBASIC21.34■■□□□ 1.01
Naf1Q3UMQ8 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Naf1Q3UMQ8 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Naf1Q3UMQ8 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Naf1Q3UMQ8 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Naf1Q3UMQ8 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Naf1Q3UMQ8 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.33■■□□□ 1.01
Naf1Q3UMQ8 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Naf1Q3UMQ8 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Naf1Q3UMQ8 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.33■■□□□ 1.01
Naf1Q3UMQ8 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Naf1Q3UMQ8 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Naf1Q3UMQ8 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Naf1Q3UMQ8 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Naf1Q3UMQ8 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Naf1Q3UMQ8 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
Naf1Q3UMQ8 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.32■■□□□ 1
Naf1Q3UMQ8 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.32■■□□□ 1
Naf1Q3UMQ8 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Naf1Q3UMQ8 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.32■■□□□ 1
Naf1Q3UMQ8 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Naf1Q3UMQ8 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Naf1Q3UMQ8 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Naf1Q3UMQ8 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Naf1Q3UMQ8 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Naf1Q3UMQ8 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Naf1Q3UMQ8 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Naf1Q3UMQ8 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Naf1Q3UMQ8 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.31■■□□□ 1
Naf1Q3UMQ8 Gm15039-201ENSMUST00000118914 875 ntBASIC21.31■■□□□ 1
Naf1Q3UMQ8 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.31■■□□□ 1
Naf1Q3UMQ8 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.31■■□□□ 1
Naf1Q3UMQ8 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Naf1Q3UMQ8 Gm9847-201ENSMUST00000052528 599 ntBASIC21.31■■□□□ 1
Naf1Q3UMQ8 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.31■■□□□ 1
Naf1Q3UMQ8 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Naf1Q3UMQ8 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Naf1Q3UMQ8 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Naf1Q3UMQ8 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Naf1Q3UMQ8 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.3■■□□□ 1
Naf1Q3UMQ8 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Naf1Q3UMQ8 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms