Protein–RNA interactions for Protein: Q3ULF4

Spg7, Paraplegin, mousemouse

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg7Q3ULF4 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Spg7Q3ULF4 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Spg7Q3ULF4 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Spg7Q3ULF4 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Spg7Q3ULF4 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
Spg7Q3ULF4 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
Spg7Q3ULF4 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Spg7Q3ULF4 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Spg7Q3ULF4 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
Spg7Q3ULF4 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
Spg7Q3ULF4 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Spg7Q3ULF4 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Spg7Q3ULF4 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Spg7Q3ULF4 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC25.25■■□□□ 1.63
Spg7Q3ULF4 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
Spg7Q3ULF4 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Spg7Q3ULF4 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Spg7Q3ULF4 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Spg7Q3ULF4 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Spg7Q3ULF4 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC25.24■■□□□ 1.63
Spg7Q3ULF4 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Spg7Q3ULF4 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Spg7Q3ULF4 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Spg7Q3ULF4 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Spg7Q3ULF4 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
Spg7Q3ULF4 Gm12821-201ENSMUST00000120022 600 ntBASIC25.23■■□□□ 1.63
Spg7Q3ULF4 Appbp2os-202ENSMUST00000206972 447 ntBASIC25.23■■□□□ 1.63
Spg7Q3ULF4 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
Spg7Q3ULF4 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Spg7Q3ULF4 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Spg7Q3ULF4 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Spg7Q3ULF4 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC25.23■■□□□ 1.63
Spg7Q3ULF4 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
Spg7Q3ULF4 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
Spg7Q3ULF4 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC25.22■■□□□ 1.63
Spg7Q3ULF4 AC115037.1-201ENSMUST00000223391 2173 ntBASIC25.22■■□□□ 1.63
Spg7Q3ULF4 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Spg7Q3ULF4 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Spg7Q3ULF4 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC25.21■■□□□ 1.63
Spg7Q3ULF4 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Spg7Q3ULF4 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Spg7Q3ULF4 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Spg7Q3ULF4 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
Spg7Q3ULF4 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC25.19■■□□□ 1.62
Spg7Q3ULF4 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
Spg7Q3ULF4 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Spg7Q3ULF4 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Spg7Q3ULF4 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Spg7Q3ULF4 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Spg7Q3ULF4 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC25.18■■□□□ 1.62
Spg7Q3ULF4 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Spg7Q3ULF4 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Spg7Q3ULF4 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Spg7Q3ULF4 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC25.17■■□□□ 1.62
Spg7Q3ULF4 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Spg7Q3ULF4 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Spg7Q3ULF4 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
Spg7Q3ULF4 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Spg7Q3ULF4 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Spg7Q3ULF4 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
Spg7Q3ULF4 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Spg7Q3ULF4 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
Spg7Q3ULF4 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Spg7Q3ULF4 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Spg7Q3ULF4 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Spg7Q3ULF4 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Spg7Q3ULF4 Gm9870-201ENSMUST00000063874 645 ntBASIC25.16■■□□□ 1.62
Spg7Q3ULF4 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Spg7Q3ULF4 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC25.15■■□□□ 1.62
Spg7Q3ULF4 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Spg7Q3ULF4 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
Spg7Q3ULF4 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC25.15■■□□□ 1.62
Spg7Q3ULF4 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC25.15■■□□□ 1.62
Spg7Q3ULF4 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Spg7Q3ULF4 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
Spg7Q3ULF4 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
Spg7Q3ULF4 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
Spg7Q3ULF4 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
Spg7Q3ULF4 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
Spg7Q3ULF4 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC25.13■■□□□ 1.61
Spg7Q3ULF4 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Spg7Q3ULF4 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
Spg7Q3ULF4 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
Spg7Q3ULF4 H3f3aos-201ENSMUST00000097448 2905 ntBASIC25.11■■□□□ 1.61
Spg7Q3ULF4 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC25.11■■□□□ 1.61
Spg7Q3ULF4 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
Spg7Q3ULF4 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Spg7Q3ULF4 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC25.11■■□□□ 1.61
Spg7Q3ULF4 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC25.11■■□□□ 1.61
Spg7Q3ULF4 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Spg7Q3ULF4 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Spg7Q3ULF4 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Spg7Q3ULF4 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC25.11■■□□□ 1.61
Spg7Q3ULF4 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC25.1■■□□□ 1.61
Spg7Q3ULF4 Gm27454-201ENSMUST00000185090 204 ntBASIC25.1■■□□□ 1.61
Spg7Q3ULF4 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Spg7Q3ULF4 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC25.1■■□□□ 1.61
Spg7Q3ULF4 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
Spg7Q3ULF4 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
Spg7Q3ULF4 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms