Protein–RNA interactions for Protein: Q3U4B1

Ssbp4, Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4Q3U4B1 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Ssbp4Q3U4B1 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Ssbp4Q3U4B1 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ssbp4Q3U4B1 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ssbp4Q3U4B1 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ssbp4Q3U4B1 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ssbp4Q3U4B1 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ssbp4Q3U4B1 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ssbp4Q3U4B1 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.7■□□□□ 0.42
Ssbp4Q3U4B1 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.7■□□□□ 0.42
Ssbp4Q3U4B1 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.7■□□□□ 0.42
Ssbp4Q3U4B1 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ssbp4Q3U4B1 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ssbp4Q3U4B1 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ssbp4Q3U4B1 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ssbp4Q3U4B1 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.69■□□□□ 0.42
Ssbp4Q3U4B1 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ssbp4Q3U4B1 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ssbp4Q3U4B1 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ssbp4Q3U4B1 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ssbp4Q3U4B1 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.69■□□□□ 0.42
Ssbp4Q3U4B1 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ssbp4Q3U4B1 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ssbp4Q3U4B1 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.68■□□□□ 0.42
Ssbp4Q3U4B1 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ssbp4Q3U4B1 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Ssbp4Q3U4B1 Gm12922-201ENSMUST00000120626 809 ntBASIC17.68■□□□□ 0.42
Ssbp4Q3U4B1 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
Ssbp4Q3U4B1 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ssbp4Q3U4B1 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.68■□□□□ 0.42
Ssbp4Q3U4B1 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ssbp4Q3U4B1 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Ssbp4Q3U4B1 H3f3aos-201ENSMUST00000097448 2905 ntBASIC17.68■□□□□ 0.42
Ssbp4Q3U4B1 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Ssbp4Q3U4B1 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssbp4Q3U4B1 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Ssbp4Q3U4B1 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.67■□□□□ 0.42
Ssbp4Q3U4B1 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
Ssbp4Q3U4B1 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssbp4Q3U4B1 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ssbp4Q3U4B1 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC17.66■□□□□ 0.42
Ssbp4Q3U4B1 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssbp4Q3U4B1 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.65■□□□□ 0.42
Ssbp4Q3U4B1 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.65■□□□□ 0.42
Ssbp4Q3U4B1 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.65■□□□□ 0.42
Ssbp4Q3U4B1 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.65■□□□□ 0.42
Ssbp4Q3U4B1 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssbp4Q3U4B1 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssbp4Q3U4B1 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssbp4Q3U4B1 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.65■□□□□ 0.42
Ssbp4Q3U4B1 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ssbp4Q3U4B1 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssbp4Q3U4B1 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Ssbp4Q3U4B1 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ssbp4Q3U4B1 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC17.64■□□□□ 0.41
Ssbp4Q3U4B1 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.64■□□□□ 0.41
Ssbp4Q3U4B1 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.64■□□□□ 0.41
Ssbp4Q3U4B1 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.64■□□□□ 0.41
Ssbp4Q3U4B1 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ssbp4Q3U4B1 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.64■□□□□ 0.41
Ssbp4Q3U4B1 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ssbp4Q3U4B1 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ssbp4Q3U4B1 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.63■□□□□ 0.41
Ssbp4Q3U4B1 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Ssbp4Q3U4B1 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Ssbp4Q3U4B1 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ssbp4Q3U4B1 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.63■□□□□ 0.41
Ssbp4Q3U4B1 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.63■□□□□ 0.41
Ssbp4Q3U4B1 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ssbp4Q3U4B1 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ssbp4Q3U4B1 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ssbp4Q3U4B1 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.62■□□□□ 0.41
Ssbp4Q3U4B1 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Ssbp4Q3U4B1 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ssbp4Q3U4B1 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Ssbp4Q3U4B1 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ssbp4Q3U4B1 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ssbp4Q3U4B1 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Ssbp4Q3U4B1 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ssbp4Q3U4B1 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Ssbp4Q3U4B1 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ssbp4Q3U4B1 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ssbp4Q3U4B1 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ssbp4Q3U4B1 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ssbp4Q3U4B1 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ssbp4Q3U4B1 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ssbp4Q3U4B1 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Ssbp4Q3U4B1 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ssbp4Q3U4B1 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.6■□□□□ 0.41
Ssbp4Q3U4B1 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.6■□□□□ 0.41
Ssbp4Q3U4B1 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ssbp4Q3U4B1 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.6■□□□□ 0.41
Ssbp4Q3U4B1 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ssbp4Q3U4B1 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ssbp4Q3U4B1 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ssbp4Q3U4B1 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Ssbp4Q3U4B1 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ssbp4Q3U4B1 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ssbp4Q3U4B1 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ssbp4Q3U4B1 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms