Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Q3U1D9 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Q3U1D9 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.29■□□□□ 0.52
Q3U1D9 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Q3U1D9 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.29■□□□□ 0.52
Q3U1D9 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Q3U1D9 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Q3U1D9 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Q3U1D9 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Q3U1D9 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Q3U1D9 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.28■□□□□ 0.52
Q3U1D9 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.28■□□□□ 0.52
Q3U1D9 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Q3U1D9 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Q3U1D9 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Q3U1D9 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Q3U1D9 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.28■□□□□ 0.52
Q3U1D9 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Q3U1D9 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Q3U1D9 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Q3U1D9 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Q3U1D9 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Q3U1D9 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Q3U1D9 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Q3U1D9 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Q3U1D9 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Q3U1D9 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Q3U1D9 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Q3U1D9 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Q3U1D9 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.26■□□□□ 0.51
Q3U1D9 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.26■□□□□ 0.51
Q3U1D9 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Q3U1D9 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.26■□□□□ 0.51
Q3U1D9 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Q3U1D9 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Q3U1D9 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Q3U1D9 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Q3U1D9 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Q3U1D9 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Q3U1D9 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Q3U1D9 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.24■□□□□ 0.51
Q3U1D9 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Q3U1D9 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Q3U1D9 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.24■□□□□ 0.51
Q3U1D9 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.24■□□□□ 0.51
Q3U1D9 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Q3U1D9 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Q3U1D9 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Q3U1D9 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Q3U1D9 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Q3U1D9 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Q3U1D9 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Q3U1D9 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Q3U1D9 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Q3U1D9 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Q3U1D9 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.23■□□□□ 0.51
Q3U1D9 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.23■□□□□ 0.51
Q3U1D9 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.23■□□□□ 0.51
Q3U1D9 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Q3U1D9 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Q3U1D9 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Q3U1D9 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Q3U1D9 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.22■□□□□ 0.51
Q3U1D9 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Q3U1D9 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Q3U1D9 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Q3U1D9 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Q3U1D9 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.22■□□□□ 0.51
Q3U1D9 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Q3U1D9 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Q3U1D9 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Q3U1D9 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Q3U1D9 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Q3U1D9 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.21■□□□□ 0.51
Q3U1D9 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.21■□□□□ 0.51
Q3U1D9 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Q3U1D9 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.21■□□□□ 0.51
Q3U1D9 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
Q3U1D9 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Q3U1D9 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.2■□□□□ 0.5
Q3U1D9 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.2■□□□□ 0.5
Q3U1D9 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.2■□□□□ 0.5
Q3U1D9 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.2■□□□□ 0.5
Q3U1D9 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Q3U1D9 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Q3U1D9 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.2■□□□□ 0.5
Q3U1D9 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Q3U1D9 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Q3U1D9 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Q3U1D9 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Q3U1D9 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Q3U1D9 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Q3U1D9 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Q3U1D9 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Q3U1D9 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Q3U1D9 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Q3U1D9 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Q3U1D9 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Q3U1D9 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Q3U1D9 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms