Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sox4Q06831 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sox4Q06831 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.72■□□□□ 0.91
Sox4Q06831 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sox4Q06831 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.72■□□□□ 0.91
Sox4Q06831 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.72■□□□□ 0.91
Sox4Q06831 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.72■□□□□ 0.91
Sox4Q06831 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sox4Q06831 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sox4Q06831 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sox4Q06831 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.71■□□□□ 0.91
Sox4Q06831 Etf1-202ENSMUST00000180351 108 ntBASIC20.71■□□□□ 0.91
Sox4Q06831 Gm10399-202ENSMUST00000202768 748 ntBASIC20.71■□□□□ 0.91
Sox4Q06831 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sox4Q06831 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Sox4Q06831 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Sox4Q06831 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sox4Q06831 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sox4Q06831 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
Sox4Q06831 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.7■□□□□ 0.9
Sox4Q06831 Gm45102-201ENSMUST00000207427 857 ntBASIC20.7■□□□□ 0.9
Sox4Q06831 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.7■□□□□ 0.9
Sox4Q06831 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Sox4Q06831 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Sox4Q06831 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sox4Q06831 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.69■□□□□ 0.9
Sox4Q06831 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Sox4Q06831 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sox4Q06831 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sox4Q06831 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Sox4Q06831 Gm40881-201ENSMUST00000223397 166 ntBASIC20.68■□□□□ 0.9
Sox4Q06831 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sox4Q06831 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Sox4Q06831 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.67■□□□□ 0.9
Sox4Q06831 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.67■□□□□ 0.9
Sox4Q06831 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
Sox4Q06831 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sox4Q06831 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.66■□□□□ 0.9
Sox4Q06831 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Sox4Q06831 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sox4Q06831 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.66■□□□□ 0.9
Sox4Q06831 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.65■□□□□ 0.9
Sox4Q06831 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sox4Q06831 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Sox4Q06831 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sox4Q06831 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Sox4Q06831 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sox4Q06831 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sox4Q06831 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sox4Q06831 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Sox4Q06831 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.64■□□□□ 0.9
Sox4Q06831 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Sox4Q06831 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Sox4Q06831 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sox4Q06831 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sox4Q06831 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sox4Q06831 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Sox4Q06831 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sox4Q06831 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sox4Q06831 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sox4Q06831 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sox4Q06831 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.63■□□□□ 0.89
Sox4Q06831 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.63■□□□□ 0.89
Sox4Q06831 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.63■□□□□ 0.89
Sox4Q06831 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sox4Q06831 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sox4Q06831 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Sox4Q06831 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sox4Q06831 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.63■□□□□ 0.89
Sox4Q06831 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Sox4Q06831 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Sox4Q06831 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sox4Q06831 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
Sox4Q06831 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sox4Q06831 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sox4Q06831 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sox4Q06831 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sox4Q06831 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Sox4Q06831 Gm7417-201ENSMUST00000192950 473 ntBASIC20.62■□□□□ 0.89
Sox4Q06831 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sox4Q06831 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Sox4Q06831 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sox4Q06831 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Sox4Q06831 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sox4Q06831 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sox4Q06831 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.61■□□□□ 0.89
Sox4Q06831 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sox4Q06831 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.61■□□□□ 0.89
Sox4Q06831 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Sox4Q06831 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sox4Q06831 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Sox4Q06831 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.6■□□□□ 0.89
Sox4Q06831 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sox4Q06831 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sox4Q06831 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Sox4Q06831 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sox4Q06831 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sox4Q06831 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sox4Q06831 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Sox4Q06831 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms