Protein–RNA interactions for Protein: Q04742

Emx1, Homeobox protein EMX1, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Emx1Q04742 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Emx1Q04742 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Emx1Q04742 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Emx1Q04742 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Emx1Q04742 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Emx1Q04742 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Emx1Q04742 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Emx1Q04742 Gm10420-201ENSMUST00000121713 882 ntBASIC19.48■□□□□ 0.71
Emx1Q04742 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Emx1Q04742 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Emx1Q04742 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Emx1Q04742 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.48■□□□□ 0.71
Emx1Q04742 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Emx1Q04742 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Emx1Q04742 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Emx1Q04742 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Emx1Q04742 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Emx1Q04742 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Emx1Q04742 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Emx1Q04742 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.47■□□□□ 0.71
Emx1Q04742 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Emx1Q04742 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.47■□□□□ 0.71
Emx1Q04742 Terc-201ENSMUST00000082862 423 ntBASIC19.47■□□□□ 0.71
Emx1Q04742 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Emx1Q04742 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Emx1Q04742 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Emx1Q04742 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Emx1Q04742 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Emx1Q04742 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Emx1Q04742 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Emx1Q04742 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.46■□□□□ 0.71
Emx1Q04742 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Emx1Q04742 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.46■□□□□ 0.71
Emx1Q04742 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Emx1Q04742 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.46■□□□□ 0.71
Emx1Q04742 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.46■□□□□ 0.71
Emx1Q04742 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Emx1Q04742 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Emx1Q04742 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Emx1Q04742 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Emx1Q04742 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Emx1Q04742 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Emx1Q04742 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Emx1Q04742 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Emx1Q04742 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Emx1Q04742 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Emx1Q04742 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Emx1Q04742 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Emx1Q04742 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Emx1Q04742 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Emx1Q04742 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Emx1Q04742 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Emx1Q04742 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Emx1Q04742 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Emx1Q04742 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Emx1Q04742 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Emx1Q04742 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.42■□□□□ 0.7
Emx1Q04742 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.42■□□□□ 0.7
Emx1Q04742 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Emx1Q04742 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Emx1Q04742 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Emx1Q04742 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Emx1Q04742 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Emx1Q04742 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Emx1Q04742 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Emx1Q04742 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.41■□□□□ 0.7
Emx1Q04742 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Emx1Q04742 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
Emx1Q04742 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Emx1Q04742 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.41■□□□□ 0.7
Emx1Q04742 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Emx1Q04742 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Emx1Q04742 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Emx1Q04742 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
Emx1Q04742 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.4■□□□□ 0.7
Emx1Q04742 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.4■□□□□ 0.7
Emx1Q04742 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Emx1Q04742 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Emx1Q04742 Gm5921-201ENSMUST00000075898 882 ntBASIC19.4■□□□□ 0.7
Emx1Q04742 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Emx1Q04742 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Emx1Q04742 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Emx1Q04742 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Emx1Q04742 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Emx1Q04742 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.39■□□□□ 0.69
Emx1Q04742 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Emx1Q04742 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Emx1Q04742 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.38■□□□□ 0.69
Emx1Q04742 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.38■□□□□ 0.69
Emx1Q04742 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Emx1Q04742 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Emx1Q04742 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Emx1Q04742 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Emx1Q04742 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Emx1Q04742 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Emx1Q04742 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Emx1Q04742 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Emx1Q04742 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Emx1Q04742 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Emx1Q04742 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms