Protein–RNA interactions for Protein: P82348

Sgcg, Gamma-sarcoglycan, mousemouse

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcgP82348 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SgcgP82348 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SgcgP82348 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SgcgP82348 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.77■□□□□ 0.92
SgcgP82348 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SgcgP82348 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
SgcgP82348 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SgcgP82348 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
SgcgP82348 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SgcgP82348 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
SgcgP82348 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SgcgP82348 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SgcgP82348 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SgcgP82348 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.76■□□□□ 0.91
SgcgP82348 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SgcgP82348 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
SgcgP82348 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SgcgP82348 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SgcgP82348 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SgcgP82348 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SgcgP82348 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SgcgP82348 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SgcgP82348 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SgcgP82348 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SgcgP82348 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SgcgP82348 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SgcgP82348 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
SgcgP82348 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SgcgP82348 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SgcgP82348 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.73■□□□□ 0.91
SgcgP82348 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SgcgP82348 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SgcgP82348 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SgcgP82348 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.73■□□□□ 0.91
SgcgP82348 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SgcgP82348 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SgcgP82348 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SgcgP82348 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SgcgP82348 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SgcgP82348 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.72■□□□□ 0.91
SgcgP82348 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.72■□□□□ 0.91
SgcgP82348 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SgcgP82348 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SgcgP82348 Gm15039-201ENSMUST00000118914 875 ntBASIC20.71■□□□□ 0.91
SgcgP82348 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SgcgP82348 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.71■□□□□ 0.91
SgcgP82348 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SgcgP82348 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SgcgP82348 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SgcgP82348 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SgcgP82348 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SgcgP82348 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SgcgP82348 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
SgcgP82348 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SgcgP82348 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.7■□□□□ 0.9
SgcgP82348 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
SgcgP82348 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SgcgP82348 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SgcgP82348 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SgcgP82348 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SgcgP82348 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SgcgP82348 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SgcgP82348 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SgcgP82348 Gm9847-201ENSMUST00000052528 599 ntBASIC20.69■□□□□ 0.9
SgcgP82348 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SgcgP82348 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SgcgP82348 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SgcgP82348 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SgcgP82348 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SgcgP82348 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.68■□□□□ 0.9
SgcgP82348 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SgcgP82348 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SgcgP82348 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.68■□□□□ 0.9
SgcgP82348 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SgcgP82348 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SgcgP82348 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SgcgP82348 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SgcgP82348 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SgcgP82348 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SgcgP82348 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SgcgP82348 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SgcgP82348 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SgcgP82348 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SgcgP82348 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SgcgP82348 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SgcgP82348 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.67■□□□□ 0.9
SgcgP82348 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SgcgP82348 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SgcgP82348 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.66■□□□□ 0.9
SgcgP82348 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SgcgP82348 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
SgcgP82348 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SgcgP82348 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SgcgP82348 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SgcgP82348 Gm21956-201ENSMUST00000179946 522 ntBASIC20.65■□□□□ 0.9
SgcgP82348 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SgcgP82348 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
SgcgP82348 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
SgcgP82348 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SgcgP82348 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms