Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rpl39P62892 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rpl39P62892 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rpl39P62892 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rpl39P62892 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rpl39P62892 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rpl39P62892 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Rpl39P62892 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rpl39P62892 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC14.93□□□□□ -0.02
Rpl39P62892 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpl39P62892 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpl39P62892 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpl39P62892 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpl39P62892 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpl39P62892 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpl39P62892 Gm43403-201ENSMUST00000198011 1786 ntBASIC14.93□□□□□ -0.02
Rpl39P62892 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpl39P62892 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC14.92□□□□□ -0.02
Rpl39P62892 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpl39P62892 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpl39P62892 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpl39P62892 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC14.92□□□□□ -0.02
Rpl39P62892 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Rpl39P62892 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpl39P62892 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Rpl39P62892 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpl39P62892 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Rpl39P62892 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpl39P62892 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC14.92□□□□□ -0.02
Rpl39P62892 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rpl39P62892 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rpl39P62892 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Rpl39P62892 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rpl39P62892 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rpl39P62892 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC14.91□□□□□ -0.02
Rpl39P62892 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC14.9□□□□□ -0.02
Rpl39P62892 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rpl39P62892 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rpl39P62892 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC14.9□□□□□ -0.02
Rpl39P62892 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rpl39P62892 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rpl39P62892 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rpl39P62892 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Rpl39P62892 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rpl39P62892 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rpl39P62892 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Rpl39P62892 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC14.89□□□□□ -0.03
Rpl39P62892 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rpl39P62892 Iqck-206ENSMUST00000208658 2891 ntBASIC14.89□□□□□ -0.03
Rpl39P62892 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rpl39P62892 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rpl39P62892 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rpl39P62892 Gm8503-201ENSMUST00000118131 455 ntBASIC14.89□□□□□ -0.03
Rpl39P62892 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rpl39P62892 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Rpl39P62892 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rpl39P62892 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Rpl39P62892 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rpl39P62892 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rpl39P62892 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Rpl39P62892 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rpl39P62892 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Rpl39P62892 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
Rpl39P62892 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rpl39P62892 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rpl39P62892 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rpl39P62892 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rpl39P62892 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC14.87□□□□□ -0.03
Rpl39P62892 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Rpl39P62892 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC14.87□□□□□ -0.03
Rpl39P62892 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC14.87□□□□□ -0.03
Rpl39P62892 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rpl39P62892 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rpl39P62892 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rpl39P62892 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rpl39P62892 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rpl39P62892 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rpl39P62892 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rpl39P62892 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rpl39P62892 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Rpl39P62892 Snhg20-203ENSMUST00000182811 2153 ntBASIC14.86□□□□□ -0.03
Rpl39P62892 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC14.86□□□□□ -0.03
Rpl39P62892 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rpl39P62892 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rpl39P62892 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC14.86□□□□□ -0.03
Rpl39P62892 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rpl39P62892 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rpl39P62892 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rpl39P62892 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rpl39P62892 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rpl39P62892 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rpl39P62892 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rpl39P62892 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rpl39P62892 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Rpl39P62892 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rpl39P62892 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Rpl39P62892 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rpl39P62892 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rpl39P62892 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Rpl39P62892 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms