Protein–RNA interactions for Protein: P62812

Gabra1, Gamma-aminobutyric acid receptor subunit alpha-1, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabra1P62812 AC131739.1-201ENSMUST00000221692 1245 ntBASIC17.62■□□□□ 0.41
Gabra1P62812 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gabra1P62812 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gabra1P62812 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gabra1P62812 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gabra1P62812 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gabra1P62812 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Gabra1P62812 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gabra1P62812 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gabra1P62812 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Gabra1P62812 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC17.61■□□□□ 0.41
Gabra1P62812 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gabra1P62812 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Gabra1P62812 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Gabra1P62812 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gabra1P62812 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Gabra1P62812 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Gabra1P62812 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.6■□□□□ 0.41
Gabra1P62812 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Gabra1P62812 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gabra1P62812 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gabra1P62812 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gabra1P62812 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Gabra1P62812 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gabra1P62812 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.59■□□□□ 0.41
Gabra1P62812 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Gabra1P62812 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gabra1P62812 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Gabra1P62812 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.59■□□□□ 0.41
Gabra1P62812 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gabra1P62812 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gabra1P62812 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gabra1P62812 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gabra1P62812 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gabra1P62812 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gabra1P62812 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.58■□□□□ 0.4
Gabra1P62812 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC17.58■□□□□ 0.4
Gabra1P62812 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC17.58■□□□□ 0.4
Gabra1P62812 AC122317.2-201ENSMUST00000218708 1248 ntBASIC17.58■□□□□ 0.4
Gabra1P62812 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC17.58■□□□□ 0.4
Gabra1P62812 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Gabra1P62812 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gabra1P62812 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gabra1P62812 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Gabra1P62812 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Gabra1P62812 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.58■□□□□ 0.4
Gabra1P62812 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gabra1P62812 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gabra1P62812 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gabra1P62812 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gabra1P62812 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gabra1P62812 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gabra1P62812 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Gabra1P62812 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Gabra1P62812 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gabra1P62812 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gabra1P62812 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Gabra1P62812 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gabra1P62812 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC17.56■□□□□ 0.4
Gabra1P62812 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Gabra1P62812 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gabra1P62812 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gabra1P62812 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.56■□□□□ 0.4
Gabra1P62812 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Gabra1P62812 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gabra1P62812 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Gabra1P62812 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gabra1P62812 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gabra1P62812 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gabra1P62812 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gabra1P62812 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gabra1P62812 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gabra1P62812 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gabra1P62812 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.55■□□□□ 0.4
Gabra1P62812 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.55■□□□□ 0.4
Gabra1P62812 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Gabra1P62812 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gabra1P62812 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC17.55■□□□□ 0.4
Gabra1P62812 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gabra1P62812 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Gabra1P62812 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gabra1P62812 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gabra1P62812 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.54■□□□□ 0.4
Gabra1P62812 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Gabra1P62812 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gabra1P62812 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Gabra1P62812 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC17.54■□□□□ 0.4
Gabra1P62812 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC17.54■□□□□ 0.4
Gabra1P62812 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gabra1P62812 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gabra1P62812 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Gabra1P62812 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Gabra1P62812 Terc-201ENSMUST00000082862 423 ntBASIC17.53■□□□□ 0.4
Gabra1P62812 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gabra1P62812 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gabra1P62812 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gabra1P62812 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Gabra1P62812 Gm12818-201ENSMUST00000117562 1349 ntBASIC17.52■□□□□ 0.4
Gabra1P62812 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gabra1P62812 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms